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CircRNAs in hematopoiesis and hematological malignancies
- Source :
- Blood Cancer Journal
- Publication Year :
- 2016
-
Abstract
- Cell states in hematopoiesis are controlled by master regulators and by complex circuits of a growing family of RNA species impacting cell phenotype maintenance and plasticity. Circular RNAs (circRNAs) are rapidly gaining the status of particularly stable transcriptome members with distinctive qualities. RNA-seq identified thousands of circRNAs with developmental stage- and tissue-specific expression corroborating earlier suggestions that circular isoforms are a natural feature of the cell expression program. CircRNAs are abundantly expressed also in the hematopoietic compartment. There are a number of studies on circRNAs in blood cells, a specific overview is however lacking. In this review we first present current insight in circRNA biogenesis discussing the relevance for hematopoiesis of the highly interleaved processes of splicing and circRNA biogenesis. Regarding molecular functions circRNAs modulate host gene expression, but also compete for binding of microRNAs, RNA-binding proteins or translation initiation and participate in regulatory circuits. We examine circRNA expression in the hematopoietic compartment and in hematologic malignancies and review the recent breakthrough study that identified pathogenic circRNAs derived from leukemia fusion genes. CircRNA high and regulated expression in blood cell types indicate that further studies are warranted to inform the position of these regulators in normal and malignant hematopoiesis.
- Subjects :
- 0301 basic medicine
RNA Splicing
Cell
Circular
Computational biology
Review
Biology
Blood cell
Transcriptome
03 medical and health sciences
microRNA
medicine
Compartment (development)
Humans
Neoplastic
High-Throughput Nucleotide Sequencing
Hematology
RNA, Circular
Hematopoiesis
Gene Expression Regulation, Neoplastic
MicroRNAs
030104 developmental biology
medicine.anatomical_structure
Gene Expression Regulation
Oncology
Hematologic Neoplasms
Immunology
RNA splicing
RNA
Stem cell
Biogenesis
Subjects
Details
- Language :
- English
- Database :
- OpenAIRE
- Journal :
- Blood Cancer Journal
- Accession number :
- edsair.doi.dedup.....eca1c1cbdc89d054ccc6e90b44f612ee