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OGDHL closely associates with tumor microenvironment and can serve as a prognostic biomarker for papillary thyroid cancer

Authors :
Wen-hui Huang
Jing Liu
Jie Zheng
Jie-Hua Li
Min Mao
Rongzhi Huang
Hai-qi Liang
Source :
Cancer Medicine, Vol 10, Iss 2, Pp 728-736 (2021), Cancer Medicine
Publication Year :
2021
Publisher :
Wiley, 2021.

Abstract

Background Papillary thyroid cancer (PTC) is the most common type of thyroid cancer. However, due to the lack of reliable prognostic biomarkers for PTC, overtreatment has been on the rise. Therefore, our research aims to identify new and promising prognostic biomarkers and provide fresh perspectives for clinical decision making. Methods The RNA‐seq data and clinical data of PTC samples were obtained from The Cancer Genome Atlas data portal. GSE64912 and GSE83520 datasets were downloaded through the GEOquery R package. The difference in the expression of oxoglutarate dehydrogenase like (OGDHL) between PTC and normal tissues was explored by the Wilcoxon test. Kaplan–Meier (KM) and Cox regression analyses were used to further explore the prognostic value of OGDHL. The tumor microenvironments of PTC patients were explored based on ssGSEA and Tumor Immune Estimation Resource online database. Gene Set Enrichment Analysis (GSEA) was performed to explore the biological processes associated with OGDHL. Results The expression level of OGDHL in PTC was significantly altered compared to that in normal tissues (p<br />Our study proved that the expression of OGDHL was closely related to the prognosis of PTC, and could be used as a new promising prognostic biomarker for PTC.

Details

Language :
English
ISSN :
20457634
Volume :
10
Issue :
2
Database :
OpenAIRE
Journal :
Cancer Medicine
Accession number :
edsair.doi.dedup.....eb66469f16d5512f7bef07860b3b108c