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Exploring digenic inheritance in arrhythmogenic cardiomyopathy
- Source :
- BMC Medical Genetics, Vol 18, Iss 1, Pp 1-12 (2017), BMC Medical Genetics
- Publication Year :
- 2017
- Publisher :
- Springer Science and Business Media LLC, 2017.
-
Abstract
- Background Arrhythmogenic cardiomyopathy (ACM) is an inherited genetic disorder, characterized by the substitution of heart muscle with fibro-fatty tissue and severe ventricular arrhythmias, often leading to heart failure and sudden cardiac death. ACM is considered a monogenic disorder, but the low penetrance of mutations identified in patients suggests the involvement of additional genetic or environmental factors. Methods We used whole exome sequencing to investigate digenic inheritance in two ACM families where previous diagnostic tests have revealed a PKP2 mutation in all affected and some healthy individuals. In family members with PKP2 mutations we determined all genes that harbor variants in affected but not in healthy carriers or vice versa. We computationally prioritized the most likely candidates, focusing on known ACM genes and genes related to PKP2 through protein interactions, functional relationships, or shared biological processes. Results We identified four candidate genes in family 1, namely DAG1, DAB2IP, CTBP2 and TCF25, and eleven candidate genes in family 2. The most promising gene in the second family is TTN, a gene previously associated with ACM, in which the affected individual harbors two rare deleterious-predicted missense variants, one of which is located in the protein’s only serine kinase domain. Conclusions In this study we report genes that might act as digenic players in ACM pathogenesis, on the basis of co-segregation with PKP2 mutations. Validation in larger cohorts is still required to prove the utility of this model. Electronic supplementary material The online version of this article (10.1186/s12881-017-0503-7) contains supplementary material, which is available to authorized users.
- Subjects :
- Models, Molecular
Male
Exome sequencing
0301 basic medicine
Candidate gene
Arrhythmogenic cardiomyopathy
medicine.disease_cause
Whole Exome Sequencing
PKP2
Models
80 and over
Basic Helix-Loop-Helix Transcription Factors
Missense mutation
Connectin
Dystroglycans
Arrhythmogenic Right Ventricular Dysplasia
Genetics (clinical)
Aged, 80 and over
Genetics
Mutation
Genetic disorder
Middle Aged
Penetrance
Digenic inheritance
Pedigree
Arrhythmogenic right ventricular dysplasia
ras GTPase-Activating Proteins
Female
Co-Repressor Proteins
Research Article
Adult
lcsh:Internal medicine
lcsh:QH426-470
Nerve Tissue Proteins
Biology
03 medical and health sciences
Protein Domains
medicine
Humans
lcsh:RC31-1245
Aged
ACM
Alcohol Oxidoreductases
Plakophilins
Repressor Proteins
Molecular
medicine.disease
lcsh:Genetics
030104 developmental biology
Subjects
Details
- ISSN :
- 14712350
- Volume :
- 18
- Database :
- OpenAIRE
- Journal :
- BMC Medical Genetics
- Accession number :
- edsair.doi.dedup.....e9240ceece468012365af4242013f05a