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NGS Reveals Molecular Pathways Affected by Obesity and Weight Loss-Related Changes in miRNA Levels in Adipose Tissue
- Source :
- International Journal of Molecular Sciences, Vol 19, Iss 1, p 66 (2017), International Journal of Molecular Sciences, International Journal of Molecular Sciences; Volume 19; Issue 1; Pages: 66
- Publication Year :
- 2017
- Publisher :
- MDPI AG, 2017.
-
Abstract
- Both obesity and weight loss may cause molecular changes in adipose tissue. This study aimed to characterize changes in adipose tissue miRNome in order to identify molecular pathways affected by obesity and weight changes. Next generation sequencing (NGS) was applied to identify microRNAs (miRNAs) differentially expressed in 47 samples of visceral (VAT) and subcutaneous (SAT) adipose tissues from normal-weight (N), obese (O) and obese after surgery-induced weight loss (PO) individuals. Subsequently miRNA expression was validated by real-time PCR in 197 adipose tissues and bioinformatics analysis performed to identify molecular pathways affected by obesity-related changes in miRNA expression. NGS identified 344 miRNAs expressed in adipose tissues with ≥5 reads per million. Using >2 and
- Subjects :
- 0301 basic medicine
Male
medicine.medical_specialty
obesity
Adipose tissue
030209 endocrinology & metabolism
Biology
Catalysis
DNA sequencing
Article
Inorganic Chemistry
lcsh:Chemistry
03 medical and health sciences
0302 clinical medicine
Weight loss
Internal medicine
microRNA
Weight Loss
medicine
Humans
Physical and Theoretical Chemistry
Molecular Biology
lcsh:QH301-705.5
Spectroscopy
next generation sequencing
Lost Weight
Organic Chemistry
High-Throughput Nucleotide Sequencing
miRNome
Differential regulation
General Medicine
medicine.disease
Obesity
Fold change
Computer Science Applications
adipose tissue
MicroRNAs
030104 developmental biology
Endocrinology
Gene Expression Regulation
lcsh:Biology (General)
lcsh:QD1-999
molecular pathways
Female
sense organs
medicine.symptom
Transcriptome
Signal Transduction
Subjects
Details
- Language :
- English
- ISSN :
- 14220067
- Volume :
- 19
- Issue :
- 1
- Database :
- OpenAIRE
- Journal :
- International Journal of Molecular Sciences
- Accession number :
- edsair.doi.dedup.....e8799ce727aa34c529a4048118c46ecf