Back to Search
Start Over
Calreticulin Mutations in Myeloproliferative Neoplasms: Comparison of Three Diagnostic Methods
- Source :
- PLoS ONE, PLoS ONE, Public Library of Science, 2015, 10 (10), pp.e0141010. ⟨10.1371/journal.pone.0141010⟩, PLoS ONE, Vol 10, Iss 10, p e0141010 (2015)
- Publication Year :
- 2015
- Publisher :
- Public Library of Science (PLoS), 2015.
-
Abstract
- International audience; Calreticulin (CALR) mutations have recently been reported in 70-84% of JAK2V617F-negative myeloproliferative neoplasms (MPN), and this detection has become necessary to improve the diagnosis of MPN. In a large single-centre cohort of 298 patients suffering from Essential Thrombocythemia (ET), the JAK2V617F, CALR and MPL mutations were noted in 179 (60%), 56 (18.5%) and 13 (4.5%) respectively. For the detection of the CALR mutations, three methods were compared in parallel: high-resolution melting-curve analysis (HRM), product-sizing analysis and Sanger sequencing. The sensitivity for the HRM, product-sizing analysis and Sanger sequencing was 96.4%, 98.2% and 89.3% respectively, whereas the specificity was 96.3%, 100% and 100%. In our cohort, the product-sizing analysis was the most sensitive method and was the easiest to interpret, while the HRM was sometimes difficult to interpret. In contrast, when large series of samples were tested, HRM provided results more quickly than did the other methods, which required more time. Finally, the sequencing method, which is the reference method, had the lowest sensitivity but can be used to describe the type of mutation precisely. Altogether, our results suggest that in routine laboratory practice, product-sizing analysis is globally similar to HRM for the detection of CALR mutations, and that both may be used as first-line screening tests. If the results are positive, Sanger sequencing can be used to confirm the mutation and to determine its type. Product-sizing analysis provides sensitive and specific results, moreover, with the quantitative measurement of CALR, which might be useful to monitor specific treatments.
- Subjects :
- Adult
Male
Sequence analysis
lcsh:Medicine
Biology
medicine.disease_cause
Sensitivity and Specificity
DNA sequencing
Frameshift mutation
Young Adult
03 medical and health sciences
symbols.namesake
0302 clinical medicine
INDEL Mutation
medicine
Humans
lcsh:Science
Frameshift Mutation
Aged
030304 developmental biology
Aged, 80 and over
Sanger sequencing
Genetics
0303 health sciences
Mutation
Multidisciplinary
Essential thrombocythemia
lcsh:R
Middle Aged
medicine.disease
3. Good health
030220 oncology & carcinogenesis
Bone marrow neoplasm
biology.protein
symbols
lcsh:Q
Female
Bone Marrow Neoplasms
Calreticulin
Sequence Analysis
[SDV.MHEP]Life Sciences [q-bio]/Human health and pathology
Research Article
Subjects
Details
- ISSN :
- 19326203
- Volume :
- 10
- Database :
- OpenAIRE
- Journal :
- PLOS ONE
- Accession number :
- edsair.doi.dedup.....e6dbcd0a297d8018121f427786160342