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Nonexponential protein relaxation: dynamics of conformational change in myoglobin
- Source :
- Proceedings of the National Academy of Sciences. 90:5801-5804
- Publication Year :
- 1993
- Publisher :
- Proceedings of the National Academy of Sciences, 1993.
-
Abstract
- The picosecond evolution of the tertiary conformation of myoglobin (Mb) after photodissociation of MbCO was investigated at room temperature by probing band III, a weak iron-porphyrin charge-transfer transition near 13,110 cm-1 (763 nm) that is sensitive to the out-of-plane displacement of the iron. Upon photolysis, the iron moves out of the plane of the porphyrin, causing a blue-shift of band III and a concomitant change in the protein conformation. The dynamics for this functionally important motion are highly nonexponential, in agreement with recent molecular dynamics simulations [Kuczera, K., Lambry, J.-C., Martin, J.-L. & Karplus, M. (1993) Proc. Natl. Acad. Sci. USA 90, 5805-5807]. The conformational change likely affects the height of the barrier to ligand rebinding and may explain nonexponential NO rebinding.
- Subjects :
- Circular dichroism
Conformational change
Photolysis
Time Factors
Multidisciplinary
Myoglobin
Protein Conformation
Stereochemistry
Chemistry
Circular Dichroism
Lasers
Photodissociation
Relaxation (NMR)
Ligand (biochemistry)
Protein Structure, Tertiary
Kinetics
Molecular dynamics
chemistry.chemical_compound
Protein structure
Chemical physics
Research Article
Subjects
Details
- ISSN :
- 10916490 and 00278424
- Volume :
- 90
- Database :
- OpenAIRE
- Journal :
- Proceedings of the National Academy of Sciences
- Accession number :
- edsair.doi.dedup.....e50b0b78f72435f30749a6029ed97264
- Full Text :
- https://doi.org/10.1073/pnas.90.12.5801