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Diversity of foliar endophytic ascomycetes in the endemic Corsicanpine forests
- Source :
- Fungal Ecology, Fungal Ecology, Elsevier, 2018, 36, pp.128-140. ⟨10.1016/j.funeco.2018.07.008⟩, Fungal Ecology, 2018, 36, pp.128-140. ⟨10.1016/j.funeco.2018.07.008⟩
- Publication Year :
- 2018
- Publisher :
- HAL CCSD, 2018.
-
Abstract
- International audience; Plant leaves host species rich communities of foliar endophytic fungi (FEF). Compared to the other compartments of the plant microbiome, FEF diversity is poorly known. Here we document the communities of FEF associated with the endemic Corsican pine Pinus nigra subsp. laricio at three sites across its natural range and examine the effect of forest site, tree age and light exposure on FEF composition. Metabarcoding using next-generation sequencing provided 8,243,608 Ascomycota ITS2 sequences clustered into 642 FEF operational taxonomic units (OTUs). FEF communities did not differ in species richness across sites and tree cohorts, but differed in composition among forest patches and according to tree age. FEF community composition did not correlate with needle location (shade vs full light). Results are robust against the various options of the bioinformatic pipeline specifically developed. This study provides the first picture of FEF diversity in a Mediterranean island and underlines the complementarity of forest massifs for fungal conservation.
- Subjects :
- 0301 basic medicine
Mediterranean climate
genetic structures
Pinus nigra subsp Laricio
Plant Science
Foliar endophyte
Mediterranean
Plant use of endophytic fungi in defense
Environmental sequencing
03 medical and health sciences
Natural range
Endemism
Ecology, Evolution, Behavior and Systematics
[SDV.MP.MYC]Life Sciences [q-bio]/Microbiology and Parasitology/Mycology
Ecology
Ascomycota
biology
Host (biology)
Ecological Modeling
Fungi
15. Life on land
respiratory system
biology.organism_classification
language.human_language
030104 developmental biology
language
Metabarcoding
Species richness
[SDE.BE]Environmental Sciences/Biodiversity and Ecology
Cyclaneusma minus
Corsican
circulatory and respiratory physiology
[SDV.EE.IEO]Life Sciences [q-bio]/Ecology, environment/Symbiosis
Subjects
Details
- Language :
- English
- ISSN :
- 17545048
- Database :
- OpenAIRE
- Journal :
- Fungal Ecology, Fungal Ecology, Elsevier, 2018, 36, pp.128-140. ⟨10.1016/j.funeco.2018.07.008⟩, Fungal Ecology, 2018, 36, pp.128-140. ⟨10.1016/j.funeco.2018.07.008⟩
- Accession number :
- edsair.doi.dedup.....e039c9ffb6d56da967ddc4a1e504e64c