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Architecture of the multi‐functional SAGA complex and the molecular mechanism of holding TBP
- Source :
- FEBS Journal, FEBS Journal, 2021, 288 (10), pp.3135-3147. ⟨10.1111/febs.15563⟩, FEBS Journal, Wiley, 2020, ⟨10.1111/febs.15563⟩
- Publication Year :
- 2021
- Publisher :
- HAL CCSD, 2021.
-
Abstract
- International audience; In eukaryotes, transcription of protein encoding genes is initiated by the controlled deposition of the TATA-box binding protein TBP onto gene promoters, followed by the ordered assembly of a pre-initiation complex. The SAGA co-activator is a 19-subunit complex that stimulates transcription by the action of two chromatin-modifying enzymatic modules, a transcription activator binding module, and by delivering TBP. Recent cryo electron microscopy structures of yeast SAGA with bound nucleosome or TBP reveal the architecture of the different functional domains of the co-activator. An octamer of histone fold domains is found at the core of SAGA. This octamer, which deviates considerably from the symmetrical analogue forming the nucleosome, establishes a peripheral site for TBP binding where steric hindrance represses interaction with spurious DNA. The structures point to a mechanism for TBP delivery and release from SAGA that requires TFIIA and whose efficiency correlates with the affinity of DNA to TBP. These results provide a structural basis for understanding specific TBP delivery onto gene promoters and the role played by SAGA in regulating gene expression. The properties of the TBP delivery machine harboured by SAGA are compared with the TBP loading device present in the TFIID complex and show multiple similitudes.
- Subjects :
- 0301 basic medicine
Transcription, Genetic
[SDV]Life Sciences [q-bio]
genetic processes
information science
SAGA
TBP loading onto promoters
Saccharomyces cerevisiae
macromolecular substances
Biochemistry
environment and public health
Histones
03 medical and health sciences
0302 clinical medicine
Transcription (biology)
Nucleosome
Humans
Protein Isoforms
co-activators
[SDV.BBM]Life Sciences [q-bio]/Biochemistry, Molecular Biology
Histone octamer
Promoter Regions, Genetic
Molecular Biology
Conserved Sequence
ComputingMilieux_MISCELLANEOUS
Binding Sites
Chemistry
Promoter
Cell Biology
TATA-Box Binding Protein
TATA Box
Nucleosomes
SAGA complex
[SDV] Life Sciences [q-bio]
030104 developmental biology
Gene Expression Regulation
030220 oncology & carcinogenesis
Histone fold
Biophysics
Trans-Activators
health occupations
cryo-EM
Transcription Factor TFIID
Transcription factor II D
transcription
Transcription factor II A
Protein Binding
Signal Transduction
Subjects
Details
- Language :
- English
- ISSN :
- 1742464X and 17424658
- Database :
- OpenAIRE
- Journal :
- FEBS Journal, FEBS Journal, 2021, 288 (10), pp.3135-3147. ⟨10.1111/febs.15563⟩, FEBS Journal, Wiley, 2020, ⟨10.1111/febs.15563⟩
- Accession number :
- edsair.doi.dedup.....dde6ea28251246e55f2cbd720ae3f9c1