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Statics and dynamics of condensed DNA within phages and globules

Authors :
Theo Odijk
Source :
Philosophical Transactions of the Royal Society of London. Series A: Mathematical, Physical and Engineering Sciences. 362:1497-1517
Publication Year :
2004
Publisher :
The Royal Society, 2004.

Abstract

Several controversial issues concerning the packing of linear DNA in bacteriophages and globules are discussed. Exact relations for the osmotic pressure, capsid pressure and loading force are derived in terms of the hole size inside phages under the assumption that the DNA globule has a uniform density. A new electrostatic model is introduced for computing the osmotic pressure of rodlike polyelectrolytes at very high concentrations. At intermediate packing, a reptation model is considered for DNA diffusing within a toroidal globule. Under tight packing conditions, a model of Coulomb sliding friction is proposed. A general discussion is given of our current understanding of the statics and dynamics of confined DNA in the context of to the following experiments: characterization of the liquid crystalline phases, X-ray scattering by phages, osmotic stress measurements, cyclization within globules and single-molecule determination ofthe loading forces.<br />Comment: 32 pages, 5 figures, submitted to Phil.Trans.Roy.Soc.A ; special issue entitled "Mechanics of DNA", editor J.M.T.Thompson

Details

ISSN :
14712962 and 1364503X
Volume :
362
Database :
OpenAIRE
Journal :
Philosophical Transactions of the Royal Society of London. Series A: Mathematical, Physical and Engineering Sciences
Accession number :
edsair.doi.dedup.....db386c3ab367e333124e11390200fbe4
Full Text :
https://doi.org/10.1098/rsta.2004.1385