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Genome-wide meta-analyses of multiancestry cohorts identify multiple new susceptibility loci for refractive error and myopia

Authors :
Beate St Pourcain
Abhishek Nag
Federico Murgia
Emily Y. Chew
Veluchamy A. Barathi
James F. Wilson
Jamie E Craig
Veronique Vitart
Myopia (Cream)
Olavi Pärssinen
Cathy Williams
Sarayut Janmahasatian
Alex W. Hewitt
Felicia Hawthorne
Norbert Pfeiffer
Yik Ying Teo
Johannes R. Vingerling
Shea Ping Yip
Alan F. Wright
Tanja Zeller
Robert P. Igo
David M. Evans
Maria Schache
Nicholas J. Timpson
Fernando Rivadeneira
E-Shyong Tai
Craig E. Pennell
Ozren Polasek
Olli T. Raitakari
Tin Aung
Christian P. Müller
René Höhn
Paul Mitchell
Lennart C. Karssen
George McMahon
Mika Kähönen
Juho Wedenoja
Tien Yin Wong
Angela Döring
Jost B. Jonas
Albert Hofman
Konrad Oexle
Jugnoo S Rahi
Complications Trial
Ben A. Oostra
Kathryn P. Burdon
Pirro G. Hysi
Sudha K. Iyengar
Tim D. Spector
Li Jia Chen
Claire L. Simpson
S. Mohsen Hosseini
Dwight Stambolian
Alireza Mirshahi
Arthur A.B. Bergen
Terri L. Young
Rick Twee-Hee Ong
Andres Metspalu
Ioana Cotlarciuc
Liang Xu
Xin Zhou
Toomas Haller
Virginie J. M. Verhoeven
David A. Mackey
Brian W Fleck
André G. Uitterlinden
John P. Kemp
Chi Pui Pang
Seang-Mei Saw
Thomas Meitinger
Gabriëlle H.S. Buitendijk
Peng Chen
Joan E. Bailey-Wilson
Wei Ang
Stuart MacGregor
Caroline Hayward
Andrew D. Paterson
Jie Jin Wang
Ruoying Li
Cornelia M. van Duijn
Ching-Yu Cheng
Jiemin Liao
Theo G. M. F. Gorgels
Annemieke J.M.H. Verkerk
Mario Pirastu
Robert Wojciechowski
Christopher J Hammond
Paul N. Baird
Qiao Fan
Grant W. Montgomery
Jeremy A. Guggenheim
Wan Ting Tay
M. Kamran Ikram
Terho Lehtimäki
Ekaterina Yonova-Doing
Najaf Amin
Ronald Klein
Kari-Matti Mäkelä
Chiea Chuen Khor
Barbara E.K. Klein
Eranga N. Vithana
Yingfeng Zheng
Phillippa M. Cumberland
Caroline C W Klaver
Hoi Suen Wong
Aniket Mishra
Daniel W.H. Ho
Igor Rudan
Complications (Dcct)
Jonathan H. Lass
Zoran Vatavuk
Other departments
ANS - Amsterdam Neuroscience
Human Genetics
Ophthalmology
Pathology
Epidemiology
Cell biology
Anesthesiology
Internal Medicine
Clinical Genetics
Obstetrics & Gynecology
Amsterdam Neuroscience
Netherlands Institute for Neuroscience (NIN)
Source :
Nature Genetics; Vol 45, Nature Genetics, Verhoeven, V J M, Hysi, P G, Wojciechowski, R, Fan, Q, Guggenheim, J A, Hoehn, R, MacGregor, S, Hewitt, A W, Nag, A, Cheng, C-Y, Yonova-Doing, E, Zhou, X, Ikram, M K, Buitendijk, G H S, McMahon, G, Kemp, J P, St Pourcain, B, Simpson, C L, Makela, K-M, Lehtimaki, T, Kahonen, M, Paterson, A D, Hosseini, S M, Wong, H S, Xu, L, Jonas, J B, Parssinen, O, Wedenoja, J, Yip, S P, Ho, D W H, Pang, C P, Chen, L J, Burdon, K P, Craig, J E, Klein, B E K, Klein, R, Haller, T, Metspalu, A, Khor, C-C, Tai, E-S, Aung, T, Vithana, E, Tay, W-T, Barathi, V A, Rudan, I & Hayward, C & Wright, A F & Wilson, J F & Fleck, B & Vitart, V 2013, ' Genome-wide meta-analyses of multiancestry cohorts identify multiple new susceptibility loci for refractive error and myopia ', Nature Genetics, vol. 45, no. 3, pp. 314-318 . https://doi.org/10.1038/ng.2554, Nature genetics, 45(3), 314-318. Nature Publishing Group, Nature Genetics, 45(3), 314-318. Nature Publishing Group, Nature genetics, 45(6). Nature Publishing Group, Nature genetics, 45 (2013): 314–318. doi:10.1038/ng.2554, info:cnr-pdr/source/autori:Verhoeven VJ, Hysi PG, Wojciechowski R, Fan Q, Guggenheim JA, Höhn R, MacGregor S, Hewitt AW, Nag A, Cheng CY, Yonova-Doing E, Zhou X, Ikram MK, Buitendijk GH, McMahon G, Kemp JP, Pourcain BS, Simpson CL, Mäkelä KM, Lehtimäki T, Kähönen M, Paterson AD, Hosseini SM, Wong HS, Xu L, Jonas JB, Pärssinen O, Wedenoja J, Yip SP, Ho DW, Pang CP, Chen LJ, Burdon KP, Craig JE, Klein BE, Klein R, Haller T, Metspalu A, Khor CC, Tai ES, Aung T, Vithana E, Tay WT, Barathi VA; Consortium for Refractive Error and Myopia (CREAM), Chen P, Li R, Liao J, Zheng Y, Ong RT, Döring A; Diabetes Control and Complications Trial%2FEpidemiology of Diabetes Interventions and Complications (DCCT%2FEDIC) Research Group, Evans DM, Timpson NJ, Verkerk AJ, Meitinger T, Raitakari O, Hawthorne F, Spector TD, Karssen LC, Pirastu M, Murgia F, Ang W; Wellcome Trust Case Control Consortium 2 (WTCCC2), Mishra A, Montgomery GW, Pennell CE, Cumberland PM, Cotlarciuc I, Mitchell P, Wang JJ, Schache M, Janmahasatian S, Igo RP Jr, Lass JH, Chew E, Iyengar SK; Fuchs' Genetics Multi-Center Study Group, Gorgels TG, Rudan I, Hayward C, Wright AF, Polasek O, Vatavuk Z, Wilson JF, Fleck B, Zeller T, Mirshahi A, Müller C, Uitterlinden AG, Rivadeneira F, Vingerling JR, Hofman A, Oostra BA, Amin N, Bergen AA, Teo YY, Rahi JS, Vitart V, Williams C, Baird PN, Wong TY, Oexle K, Pfeiffer N, Mackey DA, Young TL, van Duijn CM, Saw SM, Bailey-Wilson JE, Stambolian D, Klaver CC, Hammond CJ./titolo:Genome-wide meta-analyses of multiancestry cohorts identify multiple new susceptibility loci for refractive error and myopia/doi:10.1038%2Fng.2554/rivista:Nature genetics (Print)/anno:2013/pagina_da:314/pagina_a:318/intervallo_pagine:314–318/volume:45, Nature Genetics, 45, 314-318. Nature Publishing Group
Publication Year :
2013

Abstract

Author version made available in accordance with the publisher's policy.<br />Refractive error is the most common eye disorder worldwide and is a prominent cause of blindness. Myopia affects over 30% of Western populations and up to 80% of Asians. The CREAM consortium conducted genome-wide meta-analyses, including 37,382 individuals from 27 studies of European ancestry and 8,376 from 5 Asian cohorts. We identified 16 new loci for refractive error in individuals of European ancestry, of which 8 were shared with Asians. Combined analysis identified 8 additional associated loci. The new loci include candidate genes with functions in neurotransmission (GRIA4), ion transport (KCNQ5), retinoic acid metabolism (RDH5), extracellular matrix remodeling (LAMA2 and BMP2) and eye development (SIX6 and PRSS56). We also confirmed previously reported associations with GJD2 and RASGRF1. Risk score analysis using associated SNPs showed a tenfold increased risk of myopia for individuals carrying the highest genetic load. Our results, based on a large meta-analysis across independent multiancestry studies, considerably advance understanding of the mechanisms involved in refractive error and myopia.<br />Australian National Health and Medical Research Council.

Details

ISSN :
10614036
Volume :
45
Issue :
3
Database :
OpenAIRE
Journal :
Nature Genetics
Accession number :
edsair.doi.dedup.....da83003a699c9c62b500f19b7e10faf0