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Luteimonas wenzhouensis Sp. Nov., A Chitinolytic Bacterium Isolated from a Landfill Soil
- Source :
- Current microbiology. 78(1)
- Publication Year :
- 2020
-
Abstract
- A Gram-staining-negative, aerobic, non-motile, rod-shaped bacterium with degradation ability of chitin, designated strain YD-1 T, was isolated from landfill soil sample collected in Wenzhou, Zhejiang province, China. The growth of strain YD-1 T occurred optimally in the tryptone soy broth (TSB) with 1.0% NaCl at pH 7.0–8.0, 30 °C. Ubiquinone-8 (Q-8) was the predominant quinone. The polar lipids of strain YD-1 T consisted of diphosphatidylglycerol, phosphatidylethanolamine, phosphatidylglycerol, phosphatidylcholine, five glycolipids and four lipids. The major fatty acids were iso-C15:0 (30.7%), iso-C17:1ω9c (23.2%), iso-C11:0 (18.9%), iso-C11:0 3-OH (6.8%) and iso-C17:0 (5.9%). Phylogenetic analysis based on the 16S rRNA gene sequences indicated that strain YD-1 T was affiliated to the genus Luteimonas with the highest similarity to Luteimonas marina KCTC 12327 T (97.3%), followed by Luteimonas aquatica DSM 22088 T (96.5%) and Luteimonas composti CCUG 53595 T (96.4%). The genomic DNA G + C content of strain YD-1 T was 71.8 mol%. Average nucleotide identity (ANI) and the digital DNA–DNA hybridizations (dDDH) for draft genomes between strain YD-1 T and Luteimonas marina KCTC 12327 T were 82.7% and 26.1%, respectively. On the basis of genotypic, phenotypic and chemotaxonomic data, strain YD-1 T is considered to represent a novel species to degrade chitin in the genus Luteimonas, for which the name Luteimonas wenzhouensis sp. nov. is proposed, with YD-1 T (= KCTC 72425 T = CCTCC AB 2019153 T) as the type strain.
- Subjects :
- DNA, Bacterial
Xanthomonadaceae
China
food.ingredient
Luteimonas
Luteimonas aquatica
Applied Microbiology and Biotechnology
Microbiology
03 medical and health sciences
chemistry.chemical_compound
Soil
food
Chitin
RNA, Ribosomal, 16S
Food science
Phospholipids
Phylogeny
030304 developmental biology
0303 health sciences
biology
Strain (chemistry)
030306 microbiology
Fatty Acids
General Medicine
Sequence Analysis, DNA
biology.organism_classification
16S ribosomal RNA
Bacterial Typing Techniques
Luteimonas marina
Waste Disposal Facilities
chemistry
Tryptone
Bacteria
Subjects
Details
- ISSN :
- 14320991
- Volume :
- 78
- Issue :
- 1
- Database :
- OpenAIRE
- Journal :
- Current microbiology
- Accession number :
- edsair.doi.dedup.....d9a494d5f405aee6777115097aefdb9f