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Viral rhodopsins 1 are an unique family of light-gated cation channels

Authors :
R. Astashkin
G. A. Armeev
Natalia Yutin
Andreas Offenhäusser
Ekaterina Savelyeva
Kirill Kovalev
Igor Chizhov
Dmitrii Zabelskii
Francisco Rodriguez-Valera
Ernst Bamberg
Alexander Popov
Vladan Rankovic
Maksim Rulev
Dmitry Bratanov
Valentin Gordeliy
Alexey Alekseev
Michel Vivaudou
D V Soloviov
Riccardo Rosselli
Taras Balandin
Tatiana I. Rokitskaya
Eugene V. Koonin
Georg Büldt
Svetlana Vaganova
Ana-Sofia Eria-Oliveira
Yuri N. Antonenko
Tobias Moser
Mikhail P. Kirpichnikov
A. V. Rogachev
Thomas Mager
Dieter Willbold
Elizaveta Podolyak
Dmytro Volkov
Konstantin V. Shaitan
Institute of Biological Information Processing [Jülich] (IBI-7)
Institut de biologie structurale (IBS - UMR 5075)
Centre National de la Recherche Scientifique (CNRS)-Institut de Recherche Interdisciplinaire de Grenoble (IRIG)
Direction de Recherche Fondamentale (CEA) (DRF (CEA))
Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Direction de Recherche Fondamentale (CEA) (DRF (CEA))
Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Université Grenoble Alpes (UGA)
Institute for Auditory Neuroscience and InnerEarLab
Research Center for Molecular Mechanisms of Aging and Age-related Diseases, Moscow
Hannover Medical School [Hannover] (MHH)
National Center for Biotechnology Information (NCBI)
European Synchrotron Radiation Facility (ESRF)
Belozersky Institute of Physico-Chemical Biology
Lomonosov Moscow State University (MSU)
Max-Planck-Institut für Biophysik - Max Planck Institute of Biophysics (MPIBP)
Max-Planck-Gesellschaft
Departamento de Producción Vegetal y Microbiología
Universidad Miguel Hernández [Elche] (UMH)
Lomonosov Moscow State University, Biological Faculty
N. N. Semenov Institute of Chemical Physics
Russian Academy of Sciences [Moscow] (RAS)
InnerEarLab
Department of Otolaryngology and Center for Molecular Physiology of the Brain-Georg-August-University = Georg-August-Universität Göttingen
National Center for Biotechnology Information, National Institutes of Health, Department of Health and Human Services, Bethesda, Md
National Institutes of Health [Bethesda] (NIH)
ANR-17-EURE-0003,CBH-EUR-GS,CBH-EUR-GS(2017)
ANR-19-CE11-0026,Viral_Rhodopsins,Rhodopsines virales: Structure, Fonction, et Nouveaux Outils pour l'Optogénétique(2019)
Department of Otolaryngology and Center for Molecular Physiology of the Brain-University of Göttingen - Georg-August-Universität Göttingen
Source :
Nature Communications, Nature Communications, 2020, 11 (1), ⟨10.1038/s41467-020-19457-7⟩, Nature Communications, Vol 11, Iss 1, Pp 1-16 (2020), Nature Communications, Nature Publishing Group, 2020, 11 (1), ⟨10.1038/s41467-020-19457-7⟩, Nature Communications 11(1), 5707 (2020). doi:10.1038/s41467-020-19457-7, 'Nature Communications ', vol: 11, pages: 5707-1-5707-16 (2020)
Publication Year :
2020

Abstract

Phytoplankton is the base of the marine food chain as well as oxygen and carbon cycles and thus plays a global role in climate and ecology. Nucleocytoplasmic Large DNA Viruses that infect phytoplankton organisms and regulate the phytoplankton dynamics encompass genes of rhodopsins of two distinct families. Here, we present a functional and structural characterization of two proteins of viral rhodopsin group 1, OLPVR1 and VirChR1. Functional analysis of VirChR1 shows that it is a highly selective, Na+/K+-conducting channel and, in contrast to known cation channelrhodopsins, it is impermeable to Ca2+ ions. We show that, upon illumination, VirChR1 is able to drive neural firing. The 1.4 Å resolution structure of OLPVR1 reveals remarkable differences from the known channelrhodopsins and a unique ion-conducting pathway. Thus, viral rhodopsins 1 represent a unique, large group of light-gated channels (viral channelrhodopsins, VirChR1s). In nature, VirChR1s likely mediate phototaxis of algae enhancing the host anabolic processes to support virus reproduction, and therefore, might play a major role in global phytoplankton dynamics. Moreover, VirChR1s have unique potential for optogenetics as they lack possibly noxious Ca2+ permeability.<br />Nucleocytoplasmic Large DNA Viruses (NCLDV) that infect algae encode two distinct families of microbial rhodopsins. Here, the authors characterise two proteins form the viral rhodopsin group 1 OLPVR1 and VirChR1, present the 1.4 Å crystal structure of OLPVR1 and show that viral rhodopsins 1 are light-gated cation channels.

Details

ISSN :
20411723
Database :
OpenAIRE
Journal :
Nature Communications
Accession number :
edsair.doi.dedup.....d834a22c1d45d62d39ff739a6a38a72e
Full Text :
https://doi.org/10.1038/s41467-020-19457-7