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Metadata standards and practical guidelines for specimen and DNA curation when building barcode reference libraries for aquatic life
- Source :
- Repositório Científico de Acesso Aberto de Portugal, Repositório Científico de Acesso Aberto de Portugal (RCAAP), instacron:RCAAP, Metabarcoding and Metagenomics, Metabarcoding and Metagenomics, Pensoft Publishers 2021, 5, pp.e58056. ⟨10.3897/mbmg.5.58056⟩, Metabarcoding and Metagenomics, Vol 5, Iss, Pp 17-33 (2021), Metabarcoding and Metagenomics, 2021, 5, pp.e58056. ⟨10.3897/mbmg.5.58056⟩, IRTA Pubpro. Open Digital Archive, Institut de Recerca i Tecnologia Agroalimentàries (IRTA)
- Publication Year :
- 2021
-
Abstract
- DNA barcoding and metabarcoding is increasingly used to effectively and precisely assess and monitor biodiversity in aquatic ecosystems. As these methods rely on data availability and quality of barcode reference libraries, it is important to develop and follow best practices to ensure optimal quality and traceability of the metadata associated with the reference barcodes used for identification. Sufficient metadata, as well as vouchers, corresponding to each reference barcode must be available to ensure reliable barcode library curation and, thereby, provide trustworthy baselines for downstream molecular species identification. This document (1) specifies the data and metadata required to ensure the relevance, the accessibility and traceability of DNA barcodes and (2) specifies the recommendations for DNA harvesting and for the storage of both voucher specimens/samples and barcode data<br />(undefined)
- Subjects :
- 0106 biological sciences
0301 basic medicine
Computer science
[SDV]Life Sciences [q-bio]
Ciências Biológicas [Ciências Naturais]
computer.software_genre
Barcode
01 natural sciences
DNA barcoding
law.invention
law
QH540-549.5
aquatic organisms
media_common
Database
Ecology
Quality
Voucher
Identification (information)
Aquatic organisms
quality
Biologie
Traceability
media_common.quotation_subject
reference library
Engenharia e Tecnologia::Engenharia do Ambiente
010603 evolutionary biology
03 medical and health sciences
Genetics (medical genetics to be 30107 and agricultural genetics to be 40402)
Genetics
Quality (business)
Relevance (information retrieval)
14. Life underwater
Molecular Biology
Nature and Landscape Conservation
Engenharia do Ambiente [Engenharia e Tecnologia]
Metadata
Ciências Naturais::Ciências Biológicas
metadata
barcode
Reference library
DNA
030104 developmental biology
traceability
Animal Science and Zoology
computer
Subjects
Details
- Language :
- English
- ISSN :
- 25349708
- Database :
- OpenAIRE
- Journal :
- Repositório Científico de Acesso Aberto de Portugal, Repositório Científico de Acesso Aberto de Portugal (RCAAP), instacron:RCAAP, Metabarcoding and Metagenomics, Metabarcoding and Metagenomics, Pensoft Publishers 2021, 5, pp.e58056. ⟨10.3897/mbmg.5.58056⟩, Metabarcoding and Metagenomics, Vol 5, Iss, Pp 17-33 (2021), Metabarcoding and Metagenomics, 2021, 5, pp.e58056. ⟨10.3897/mbmg.5.58056⟩, IRTA Pubpro. Open Digital Archive, Institut de Recerca i Tecnologia Agroalimentàries (IRTA)
- Accession number :
- edsair.doi.dedup.....d80985ea7d9c8a47d59d405536b699cf
- Full Text :
- https://doi.org/10.3897/mbmg.5.58056⟩