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Type I interferon-mediated autoinflammation due to DNase II deficiency

Authors :
Flavio Faletra
Gabriele Stocco
Evelyn Hartmann
Chantal Brouzes
Flavia Guillem
Fabrice Porcheray
Florence Uettwiller
Carolina Uggenti
Diego Vozzi
Marion Rabant
Capucine Picard
Nicolas Cagnard
Elisa Piscianz
Olivier Hermine
Andrea Taddio
Sophie Candon
Gunther Hartmann
Leo A. H. Zeef
Pierre Quartier
Marie Alexandra Alyanakian
Brigitte Bader-Meunier
Benoit Beitz
Gillian I. Rice
Muriel Girard
Monique Fabre
Alberto Tommasini
Dominique Lasne
Marine Depp
Nathalie Boddaert
Mathieu P Rodero
Stefano Volpi
Marco Gattorno
Yanick J. Crow
Eva Bartok
Michael Dussiot
Michel Polak
Tiffany Pascreau
Roberta Caorsi
Erika Della Mina
Naoki Kitabayashi
Annalisa Marcuzzi
Vincent Bondet
Paolo Picco
Luis Seabra
Jacques Beltrand
Erica Valencic
Marie-Louise Frémond
Bénédicte Neven
Frédéric Rieux-Laucat
Darragh Duffy
Alessandra Tesser
Patrick Nitschke
Anna Monica Bianco
Marina Charbit
Annie Harroche
Serena Pastore
Winfried Barchet
Laboratory of neurogenetics and neuroinflammation (Equipe Inserm U1163)
Imagine - Institut des maladies génétiques (IMAGINE - U1163)
Université Paris Descartes - Paris 5 (UPD5)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Université Paris Descartes - Paris 5 (UPD5)-Institut National de la Santé et de la Recherche Médicale (INSERM)
University of Trieste
University of Bonn
Academic Unit of Medical Genetic
University of Manchester [Manchester]
Microbiology Technology Institute
BIOASTER Microbiology Technology Institute [Lyon]
Immunobiologie des Cellules dendritiques
Institut Pasteur [Paris]-Institut National de la Santé et de la Recherche Médicale (INSERM)
Structure Fédérative de Recherche Necker (SFR Necker - UMS 3633 / US24)
Assistance publique - Hôpitaux de Paris (AP-HP) (AP-HP)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Université Paris Descartes - Paris 5 (UPD5)-Centre National de la Recherche Scientifique (CNRS)
Université Paris Descartes - Paris 5 (UPD5)-Institut National de la Santé et de la Recherche Médicale (INSERM)
Giannina Gaslini Institute
Istituto Giannina Gaslini, Genova
Immunologia Clinica e Sperimentale
Service d'immuno-hématologie pédiatrique [CHU Necker]
Assistance publique - Hôpitaux de Paris (AP-HP) (AP-HP)-CHU Necker - Enfants Malades [AP-HP]
Assistance publique - Hôpitaux de Paris (AP-HP) (AP-HP)
Service de Radiologie et imagerie médicale [CHU Necker]
Laboratory of molecular mechanisms of hematologic disorders and therapeutic implications (ERL 8254 - Equipe Inserm U1163)
Service de néphrologie pédiatrique [CHU Necker]
Hôpital Bicêtre
Université Paris-Sud - Paris 11 (UP11)-Assistance publique - Hôpitaux de Paris (AP-HP) (AP-HP)-Hôpital Bicêtre
Plate Forme Paris Descartes de Bioinformatique (BIP-D)
Université Paris Descartes - Paris 5 (UPD5)
Centre d'étude des Déficits Immunitaires
Service d'endocrinologie, gynécologie et diabétologie pédiatriques [CHU Necker]
CHU Necker - Enfants Malades [AP-HP]
Assistance publique - Hôpitaux de Paris (AP-HP) (AP-HP)-Assistance publique - Hôpitaux de Paris (AP-HP) (AP-HP)
Department of Life Sciences
Institute of Clinical Chemistry and Pharmacology, Center for Integrated Oncology
University Hospital of Bonn
Service d'Hématologie Adulte
IRCCS Burlo Garofolo, Inst Maternal & Child Hlth, Trieste, Italy
Y.J.C. acknowledges the European Research Council (GA 309449), and a state subsidymanaged by the National Research Agency (France) under the 'Investments for the Future'program bearing the reference ANR-10-IAHU-01. We thank ImmunoQure AGfor sharing of antibodies used to assess interferon alpha protein levels in the Simoa assay.M.-L.F. is supported by the Institut National de la Santé et de la Recherche Médicale(Grant number 000427993). A.T. and M.G. acknowledge the Italian Telethon (Grant no.GGP15241A). A.T. acknowledges the Institute for Maternal and Child Health-IRCCS'Burlo Garofolo' (RC 17/2014 funded by Italian Ministry of Health, art 12 and 12bis D.lgs 502/92), the 'Associazione Azzurra Malattie Rare'and the 'Beneficientia Stiftung in Vaduz'. We would like to thank Olivier pellet and Jerome Megret from theflow cytometry platform at SFR Necker (INSERM US24-CNRS UMS 3633) for their help withperipheral blood mononuclear cell subset isolation. We would like to thank the Geno-mics Platform, INSERM UMR1163 for whole-exome sequencing. E.B., G.H., and W.B.acknowledge DZIF funding and German Research Foundation (DFG) grants EXC1023:ImmunoSensation, CRCs 670 and 704
ANR-10-IAHU-0001,Imagine,Institut Hospitalo-Universitaire Imagine(2010)
European Project: 309449,EC:FP7:ERC,ERC-2012-StG_20111109,T1-IFN(2013)
Laboratoire de Chimie et de Biochimie Pharmacologiques et Toxicologiques (LCBPT - UMR 8601)
Centre National de la Recherche Scientifique (CNRS)-Université de Paris (UP)
Université Paris Descartes - Paris 5 (UPD5)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS)
Institut du Cerveau et de la Moëlle Epinière = Brain and Spine Institute (ICM)
Université Pierre et Marie Curie - Paris 6 (UPMC)-Institut National de la Santé et de la Recherche Médicale (INSERM)-CHU Pitié-Salpêtrière [AP-HP]
Sorbonne Université-Assistance publique - Hôpitaux de Paris (AP-HP) (AP-HP)-Sorbonne Université-Assistance publique - Hôpitaux de Paris (AP-HP) (AP-HP)-Centre National de la Recherche Scientifique (CNRS)
BIOASTER
Centre National de la Recherche Scientifique (CNRS)-Université Paris Descartes - Paris 5 (UPD5)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Assistance publique - Hôpitaux de Paris (AP-HP) (AP-HP)
Università degli studi di Trieste = University of Trieste
Universität Bonn = University of Bonn
Institut Pasteur [Paris] (IP)-Institut National de la Santé et de la Recherche Médicale (INSERM)
Assistance publique - Hôpitaux de Paris (AP-HP) (AP-HP)-Université Paris Descartes - Paris 5 (UPD5)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS)
University Hospital Bonn
Vougny, Marie-Christine
Instituts Hospitalo-Universitaires - Institut Hospitalo-Universitaire Imagine - - Imagine2010 - ANR-10-IAHU-0001 - IAHU - VALID
Definition and characterization of type I interferonopathies - T1-IFN - - EC:FP7:ERC2013-03-01 - 2018-02-28 - 309449 - VALID
Rodero, Mathieu P.
Tesser, Alessandra
Bartok, Eva
Rice, Gillian I.
Della Mina, Erika
Depp, Marine
Beitz, Benoit
Bondet, Vincent
Cagnard, Nicola
Duffy, Darragh
Dussiot, Michael
Frã©mond, Marie-Louise
Gattorno, Marco
Guillem, Flavia
Kitabayashi, Naoki
Porcheray, Fabrice
Rieux-Laucat, Frederic
Seabra, Lui
Uggenti, Carolina
Volpi, Stefano
Zeef, Leo A. H.
Alyanakian, Marie-Alexandra
Beltrand, Jacque
Bianco, Anna Monica
Boddaert, Nathalie
Brouzes, Chantal
Candon, Sophie
Caorsi, Roberta
Charbit, Marina
Fabre, Monique
Faletra, Flavio
Girard, Muriel
Harroche, Annie
Hartmann, Evelyn
Lasne, Dominique
Marcuzzi, Annalisa
Neven, Bã©nã©dicte
Nitschke, Patrick
Pascreau, Tiffany
Pastore, Serena
Picard, Capucine
Picco, Paolo
Piscianz, Elisa
Polak, Michel
Quartier, Pierre
Rabant, Marion
Stocco, Gabriele
Taddio, Andrea
Uettwiller, Florence
Valencic, Erica
Vozzi, Diego
Hartmann, Gunther
Barchet, Winfried
Hermine, Olivier
Bader-Meunier, Brigitte
Tommasini, Alberto
Crow, Yanick J.
Source :
Nature Communications, Nature Communications, Nature Publishing Group, 2017, 8 (1), pp.2176. ⟨10.1038/s41467-017-01932-3⟩, Nature Communications, Vol 8, Iss 1, Pp 1-15 (2017), Nature Communications, Nature Publishing Group, 2017, 8 (1), ⟨10.1038/S41467-017-01932-3⟩, Rodero, M P, Tesser, A, Bartok, E, Rice, G I, Della Mina, E, Depp, M, Beitz, B, Bondet, V, Cagnard, N, Duffy, D, Dussiot, M, Frémond, M, Gattorno, M, Guillem, F, Kitabayashi, N, Porcheray, F, Rieux-laucat, F, Seabra, L, Uggenti, C, Volpi, S, Zeef, L A H, Alyanakian, M, Beltrand, J, Bianco, A M, Boddaert, N, Brouzes, C, Candon, S, Caorsi, R, Charbit, M, Fabre, M, Faletra, F, Girard, M, Harroche, A, Hartmann, E, Lasne, D, Marcuzzi, A, Neven, B, Nitschke, P, Pascreau, T, Pastore, S, Picard, C, Picco, P, Piscianz, E, Polak, M, Quartier, P, Rabant, M, Stocco, G, Taddio, A, Uettwiller, F, Valencic, E, Vozzi, D, Hartmann, G, Barchet, W, Hermine, O, Bader-meunier, B, Tommasini, A & Crow, Y J 2017, ' Type I interferon-mediated autoinflammation due to DNase II deficiency ', Nature Communications, vol. 8, no. 1, 2176 . https://doi.org/10.1038/s41467-017-01932-3, Nature Communications, 2017, 8 (1), pp.2176. ⟨10.1038/s41467-017-01932-3⟩, Rodero, M P, Tesser, A, Bartok, E, Rice, G, Della Mina, E, Depp, M, Beitz, B, Bondet, V, Cagnard, N, Duffy, D, Dussiot, M, Fremond, M-L, Gattorno, M, Guillem, F, Kitabayashi, N, Porcheray, F, Rieux-Laucat, F, Seabra, L, Uggenti, C, Volpi, S, Zeef, L, Alyanakian, M-A, Beltrand, J, Bianco, A M, Boddaert, N, Brouzes, C, Candon, S, Caorsi, R, Charbit, M, Fabre, M, Faletra, F, Girard, M, Harroche, A, Hartmann, E, Lasne, D, Marcuzzi, A, Neven, B, Nitschke, P, Pascreau, T, Pastore, S, Picard, C, Picco, P P, Piscianz, E, Polak, M, Quartier, P, Rabant, M, Stocco, G, Taddio, A, Uettwiller, F, Valencic, E, Vozzi, D, Hartmann, G, Barchet, W, Hermine, O, Bader-Meunier, B, Tommasini, A & Crow, Y 2017, ' Type I interferon mediated autoinflammation due to DNase II deficiency ', Nature Communications, vol. 8, 2176 . https://doi.org/10.1038/s41467-017-01932-3
Publication Year :
2017
Publisher :
HAL CCSD, 2017.

Abstract

Microbial nucleic acid recognition serves as the major stimulus to an antiviral response, implying a requirement to limit the misrepresentation of self nucleic acids as non-self and the induction of autoinflammation. By systematic screening using a panel of interferon-stimulated genes we identify two siblings and a singleton variably demonstrating severe neonatal anemia, membranoproliferative glomerulonephritis, liver fibrosis, deforming arthropathy and increased anti-DNA antibodies. In both families we identify biallelic mutations in DNASE2, associated with a loss of DNase II endonuclease activity. We record increased interferon alpha protein levels using digital ELISA, enhanced interferon signaling by RNA-Seq analysis and constitutive upregulation of phosphorylated STAT1 and STAT3 in patient lymphocytes and monocytes. A hematological disease transcriptomic signature and increased numbers of erythroblasts are recorded in patient peripheral blood, suggesting that interferon might have a particular effect on hematopoiesis. These data define a type I interferonopathy due to DNase II deficiency in humans.<br />Nucleic acid sensing is important to ensure that an innate immune response is only mounted against microbial nucleic acid. Here, the authors identify loss-of-function mutations in the DNASE2 gene that cause type I interferon-mediated autoinflammation due to enhanced systemic interferon signaling.

Subjects

Subjects :
Genetics and Molecular Biology (all)
Male
0301 basic medicine
Erythroblasts
[SDV]Life Sciences [q-bio]
DNASE2
type I interferon
autoinflammation
exome sequencing
Up-Regulation/drug effects
General Physics and Astronomy
Erythroblasts/immunology
DNASE2, type I interferon, autoinflammation, exome sequencing
Biochemistry
LS3_11
0302 clinical medicine
Interferon
Interferon-alpha/blood
Membranoproliferative glomerulonephritis
STAT1
Phosphorylation
lcsh:Science
Child
ComputingMilieux_MISCELLANEOUS
Deoxyribonucleases
Multidisciplinary
biology
RNA, Messenger/analysis
Chemistry (all)
Endodeoxyribonucleases/deficiency
Up-Regulation
3. Good health
STAT1 Transcription Factor
[SDV.IMM]Life Sciences [q-bio]/Immunology
Female
STAT1 Transcription Factor/metabolism
Antibody
Signal Transduction
medicine.drug
STAT3 Transcription Factor
[SDV.IMM] Life Sciences [q-bio]/Immunology
Adolescent
Science
Alpha interferon
Antiviral Agents/pharmacology
Hematopoiesis/immunology
Antiviral Agents
Article
General Biochemistry, Genetics and Molecular Biology
Deoxyribonucleases/deficiency
NO
Physics and Astronomy (all)
03 medical and health sciences
Downregulation and upregulation
medicine
Humans
RNA, Messenger
Signal Transduction/immunology
Endodeoxyribonucleases
Innate immune system
Sequence Analysis, RNA
Gene Expression Profiling
Hereditary Autoinflammatory Diseases
Interferon-alpha
General Chemistry
medicine.disease
Hematopoiesis
030104 developmental biology
STAT3 Transcription Factor/metabolism
Hereditary Autoinflammatory Diseases/blood
Mutation
Immunology
biology.protein
Nucleic acid
lcsh:Q
Biochemistry, Genetics and Molecular Biology (all)
030215 immunology

Details

Language :
English
ISSN :
20411723
Database :
OpenAIRE
Journal :
Nature Communications, Nature Communications, Nature Publishing Group, 2017, 8 (1), pp.2176. ⟨10.1038/s41467-017-01932-3⟩, Nature Communications, Vol 8, Iss 1, Pp 1-15 (2017), Nature Communications, Nature Publishing Group, 2017, 8 (1), ⟨10.1038/S41467-017-01932-3⟩, Rodero, M P, Tesser, A, Bartok, E, Rice, G I, Della Mina, E, Depp, M, Beitz, B, Bondet, V, Cagnard, N, Duffy, D, Dussiot, M, Frémond, M, Gattorno, M, Guillem, F, Kitabayashi, N, Porcheray, F, Rieux-laucat, F, Seabra, L, Uggenti, C, Volpi, S, Zeef, L A H, Alyanakian, M, Beltrand, J, Bianco, A M, Boddaert, N, Brouzes, C, Candon, S, Caorsi, R, Charbit, M, Fabre, M, Faletra, F, Girard, M, Harroche, A, Hartmann, E, Lasne, D, Marcuzzi, A, Neven, B, Nitschke, P, Pascreau, T, Pastore, S, Picard, C, Picco, P, Piscianz, E, Polak, M, Quartier, P, Rabant, M, Stocco, G, Taddio, A, Uettwiller, F, Valencic, E, Vozzi, D, Hartmann, G, Barchet, W, Hermine, O, Bader-meunier, B, Tommasini, A & Crow, Y J 2017, ' Type I interferon-mediated autoinflammation due to DNase II deficiency ', Nature Communications, vol. 8, no. 1, 2176 . https://doi.org/10.1038/s41467-017-01932-3, Nature Communications, 2017, 8 (1), pp.2176. ⟨10.1038/s41467-017-01932-3⟩, Rodero, M P, Tesser, A, Bartok, E, Rice, G, Della Mina, E, Depp, M, Beitz, B, Bondet, V, Cagnard, N, Duffy, D, Dussiot, M, Fremond, M-L, Gattorno, M, Guillem, F, Kitabayashi, N, Porcheray, F, Rieux-Laucat, F, Seabra, L, Uggenti, C, Volpi, S, Zeef, L, Alyanakian, M-A, Beltrand, J, Bianco, A M, Boddaert, N, Brouzes, C, Candon, S, Caorsi, R, Charbit, M, Fabre, M, Faletra, F, Girard, M, Harroche, A, Hartmann, E, Lasne, D, Marcuzzi, A, Neven, B, Nitschke, P, Pascreau, T, Pastore, S, Picard, C, Picco, P P, Piscianz, E, Polak, M, Quartier, P, Rabant, M, Stocco, G, Taddio, A, Uettwiller, F, Valencic, E, Vozzi, D, Hartmann, G, Barchet, W, Hermine, O, Bader-Meunier, B, Tommasini, A & Crow, Y 2017, ' Type I interferon mediated autoinflammation due to DNase II deficiency ', Nature Communications, vol. 8, 2176 . https://doi.org/10.1038/s41467-017-01932-3
Accession number :
edsair.doi.dedup.....d7996f15867050dcd49eb11d20f8f073