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Proline 235 plays a key role in the regulation of the oligomeric states of Thermotoga maritima Arginine Binding Protein
- Source :
- Biochimica et biophysica acta. Proteins and proteomics 1864 (2016): 814–824. doi:10.1016/j.bbapap.2016.04.006, info:cnr-pdr/source/autori:Smaldone, Giovanni; Vigorita, Marilisa; Ruggiero, Alessia; Balasco, Nicole; Dattelbaum, Jonathan D.; D'Auria, Sabato; Del Vecchio, Pompea; Graziano, Giuseppe; Vitagliano, Luigi/titolo:Proline 235 plays a key role in the regulation of the oligomeric states of Thermotoga maritima Arginine Binding Protein/doi:10.1016%2Fj.bbapap.2016.04.006/rivista:Biochimica et biophysica acta. Proteins and proteomics/anno:2016/pagina_da:814/pagina_a:824/intervallo_pagine:814–824/volume:1864
- Publication Year :
- 2016
- Publisher :
- Elsevier BV, 2016.
-
Abstract
- The Arginine Binding Protein isolated from Thermotoga maritima (TmArgBP) is a protein endowed with several peculiar properties. We have previously shown that TmArgBP dimerization is a consequence of the swapping of the C-terminal helix. Here we explored the structural determinants of TmArgBP domain swapping and oligomerization. In particular, we report a mutational analysis of the residue Pro235, which is located in the hinge region of the swapping dimer. This residue was either replaced with a Gly-Lys dipeptide (TmArgBP P235GK ) or a Gly residue (TmArgBP P235G ). Different forms of these mutants were generated and extensively characterized using biophysical techniques. For both TmArgBP P235GK and TmArgBP P235G mutants, the occurrence of multiple oligomerization states (monomers, dimers and trimers) was detected. The formation of well-folded monomeric forms for these mutants indicates that the dimerization through C-terminal domain swapping observed in wild-type TmArgBP is driven by conformational restraints imposed by the presence of Pro235 in the hinge region. Molecular dynamics studies corroborate this observation by showing that Gly235 assumes conformational states forbidden for Pro residues in the TmArgBP P235G monomer. Unexpectedly, the trimeric forms present: (a) peculiar circular dichroism spectra, (b) a great susceptibility to heating, and (c) the ability to bind the Thioflavin T dye. The present findings clearly demonstrate that single-point mutations have an important impact on the TmArgBP oligomerization process. In a wider context, they also indicate that proteins endowed with an intrinsic propensity to swap have an easy access to states with altered structural and, possibly, functional properties.
- Subjects :
- 0301 basic medicine
Protein structure-stability
030103 biophysics
animal structures
Proline
Stereochemistry
Dimer
Molecular Sequence Data
Mutant
Biophysics
Protein Data Bank (RCSB PDB)
Molecular Dynamics Simulation
Arginine
Biochemistry
Analytical Chemistry
03 medical and health sciences
chemistry.chemical_compound
Protein oligomerization
Differential scanning calorimetry
Protein structure dynamic
Thermotoga maritima
Amino Acid Sequence
Molecular Biology
Dipeptide
Calorimetry, Differential Scanning
biology
Protein structure dynamics
Protein Stability
Chemistry
biology.organism_classification
Domain swapping
030104 developmental biology
Biophysic
Thioflavin
Protein Multimerization
Carrier Proteins
Arginine binding
Subjects
Details
- ISSN :
- 15709639
- Volume :
- 1864
- Database :
- OpenAIRE
- Journal :
- Biochimica et Biophysica Acta (BBA) - Proteins and Proteomics
- Accession number :
- edsair.doi.dedup.....d60d8b5c402236e6fd3620d6aed4be09
- Full Text :
- https://doi.org/10.1016/j.bbapap.2016.04.006