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Bioinformatic Prediction of Ultraviolet Light Mutagenesis Sensitivity of Human Genes and a Method for Genetically Engineering UVB Resistance
- Source :
- Cancer Informatics, Cancer Informatics, Vol 2011, Iss 10, Pp 121-131 (2011), Cancer Informatics, Vol 10 (2011)
- Publication Year :
- 2011
- Publisher :
- SAGE Publications, 2011.
-
Abstract
- Living on earth, we are exposed to ultraviolet (UV) light as part of the solar radiation. UVB spectrum light exposure contributes to the development of skin cancer by interacting with pyrimidine pairs to create lesions called cyclobutane pyrimidine dimers. If these lesions are not removed by nucleotide excision repair, they often give rise to C to T transition mutations. Based on these observations, a bioinformatics approach was used to predict the vulnerability of human protein coding genes to UVB induced loss of function mutations. This data was used to evaluate in depth those genes associated with malignant melanoma. In addition, we demonstrate a method of genetically engineering genes that significantly improves resistance to UVB loss of function mutations.
- Subjects :
- Cancer Research
skin cancer
integumentary system
Transition (genetics)
Melanoma
Short Report
ultraviolet light
Mutagenesis (molecular biology technique)
Pyrimidine dimer
Biology
lcsh:Neoplasms. Tumors. Oncology. Including cancer and carcinogens
medicine.disease
Bioinformatics
lcsh:RC254-282
Molecular biology
Oncology
melanoma
medicine
Ultraviolet light
Gene
mutagenesis
Loss function
Nucleotide excision repair
Subjects
Details
- ISSN :
- 11769351
- Volume :
- 10
- Database :
- OpenAIRE
- Journal :
- Cancer Informatics
- Accession number :
- edsair.doi.dedup.....d3b6da1f554e9889a147fb9d7e8d7d54
- Full Text :
- https://doi.org/10.4137/cin.s6670