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Candidate exome capture identifies mutation of SDCCAG8 as the cause of a retinal-renal ciliopathy
- Source :
- Nature Genetics, 42, 840-50, Otto, E A, Hurd, T W, Airik, R, Chaki, M, Zhou, W, Stoetzel, C, Patil, S B, Levy, S, Ghosh, A K, Murga-Zamalloa, C A, van Reeuwijk, J, Letteboer, S J F, Sang, L, Giles, R H, Liu, Q, Coene, K L M, Estrada-Cuzcano, A, Collin, R W J, McLaughlin, H M, Held, S, Kasanuki, J M, Ramaswami, G, Conte, J, Lopez, I, Washburn, J, Macdonald, J, Hu, J, Yamashita, Y, Maher, E R, Guay-Woodford, L M, Neumann, H P H, Obermüller, N, Koenekoop, R K, Bergmann, C, Bei, X, Lewis, R A, Katsanis, N, Lopes, V, Williams, D S, Lyons, R H, Dang, C V, Brito, D A, Dias, M B, Zhang, X, Cavalcoli, J D, Nürnberg, G, Nürnberg, P, Pierce, E A, Jackson, P K, Antignac, C, Saunier, S, Roepman, R, Dollfus, H, Khanna, H & Hildebrandt, F 2010, ' Candidate exome capture identifies mutation of SDCCAG8 as the cause of a retinal-renal ciliopathy ', Nature Genetics, vol. 42, no. 10, pp. 840-850 . https://doi.org/10.1038/ng.662, Nature Genetics, 42, 10, pp. 840-50, Nature genetics
- Publication Year :
- 2010
-
Abstract
- Contains fulltext : 88200.pdf (Publisher’s version ) (Closed access) Nephronophthisis-related ciliopathies (NPHP-RC) are recessive disorders that feature dysplasia or degeneration occurring preferentially in the kidney, retina and cerebellum. Here we combined homozygosity mapping with candidate gene analysis by performing 'ciliopathy candidate exome capture' followed by massively parallel sequencing. We identified 12 different truncating mutations of SDCCAG8 (serologically defined colon cancer antigen 8, also known as CCCAP) in 10 families affected by NPHP-RC. We show that SDCCAG8 is localized at both centrioles and interacts directly with OFD1 (oral-facial-digital syndrome 1), which is associated with NPHP-RC. Depletion of sdccag8 causes kidney cysts and a body axis defect in zebrafish and induces cell polarity defects in three-dimensional renal cell cultures. This work identifies loss of SDCCAG8 function as a cause of a retinal-renal ciliopathy and validates exome capture analysis for broadly heterogeneous single-gene disorders. 01 oktober 2010
- Subjects :
- Genetics and epigenetic pathways of disease [NCMLS 6]
Ciliopathies
Autoantigens
Mice
0302 clinical medicine
Polycystic kidney disease
Cyclic AMP
RNA, Small Interfering
Fluorescent Antibody Technique, Indirect
Zebrafish
Renal disorder [IGMD 9]
Genetics
0303 health sciences
Massive parallel sequencing
Reverse Transcriptase Polymerase Chain Reaction
Homozygote
Gene Expression Regulation, Developmental
Exons
Disease gene identification
3. Good health
Neoplasm Proteins
Kidney Diseases
medicine.symptom
Candidate Gene Analysis
Photoreceptor Cells, Vertebrate
Subcellular Fractions
Blotting, Western
Molecular Sequence Data
Biology
Kidney cysts
Article
Joubert syndrome
Genomic disorders and inherited multi-system disorders [IGMD 3]
03 medical and health sciences
Retinal Diseases
Two-Hybrid System Techniques
medicine
Animals
Humans
Family
RNA, Messenger
Genetic Association Studies
030304 developmental biology
Centrosome
Proteins
medicine.disease
Rats
Ciliopathy
Case-Control Studies
Mutation
030217 neurology & neurosurgery
Subjects
Details
- ISSN :
- 15461718 and 10614036
- Volume :
- 42
- Issue :
- 10
- Database :
- OpenAIRE
- Journal :
- Nature genetics
- Accession number :
- edsair.doi.dedup.....d3361e279d7f497089acb4d45d13bf65