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Polarizable Embedding Combined with the Algebraic Diagrammatic Construction: Tackling Excited States in Biomolecular Systems
- Source :
- Scheurer, M, Herbst, M F, Reinholdt, P, Olsen, J M H, Dreuw, A & Kongsted, J 2018, ' Polarizable Embedding Combined with the Algebraic Diagrammatic Construction : Tackling Excited States in Biomolecular Systems ', Journal of Chemical Theory and Computation, vol. 14, no. 9, pp. 4870–4883 . https://doi.org/10.1021/acs.jctc.8b00576
- Publication Year :
- 2018
- Publisher :
- American Chemical Society (ACS), 2018.
-
Abstract
- We present a variant of the algebraic diagrammatic construction (ADC) scheme by combining ADC with the polarizable embedding (PE) model. The presented PE-ADC method is implemented through second and third order and is designed with the aim of performing accurate calculations of excited states in large molecular systems. Accuracy and large-scale applicability are demonstrated with three case studies, and we further analyze the importance of both state-specific and linear-response-type corrections to the excitation energies in the presence of the polarizable environment. We demonstrate how our combined method can be readily applied to study photoinduced biochemical processes as we model the charge-transfer (CT) excitation which is key to the photoprotection mechanism in the dodecin protein with PE-ADC(2). Through direct access to state-of-the-art excited state analysis, we find that the polarizable environment plays a decisive role by significantly increasing the CT character of the electronic excitation in dodecin. PE-ADC is thus suited to decipher photoinduced processes in complex, biomolecular systems at high precision and at reasonable computational cost.
- Subjects :
- Models, Molecular
Flavins/chemistry
Electrons
010402 general chemistry
01 natural sciences
Polarizability
Flavins
0103 physical sciences
Aniline Compounds/chemistry
Statistical physics
Physical and Theoretical Chemistry
Algebraic number
Physics
Aniline Compounds
010304 chemical physics
Water
0104 chemical sciences
Computer Science Applications
Diagrammatic reasoning
Third order
Water/chemistry
Excited state
Scheme (mathematics)
Quantum Theory
Embedding
Excitation
Subjects
Details
- ISSN :
- 15499626 and 15499618
- Volume :
- 14
- Database :
- OpenAIRE
- Journal :
- Journal of Chemical Theory and Computation
- Accession number :
- edsair.doi.dedup.....d2ee9231f359a8b1e85be8640a675202
- Full Text :
- https://doi.org/10.1021/acs.jctc.8b00576