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Nucleome Browser: An integrative and multimodal data navigation platform for 4D Nucleome

Authors :
Xiaopeng Zhu
Yang Zhang
Yuchuan Wang
Dechao Tian
Andrew S. Belmont
Jason R. Swedlow
Jian Ma
Source :
Nat Methods
Publication Year :
2022
Publisher :
Cold Spring Harbor Laboratory, 2022.

Abstract

We introduce Nucleome Browser (http://www.nucleome.org), an interactive, multimodal data visualization and exploration platform for 4D Nucleome research. Our tool effectively integrates heterogeneous datasets (e.g., genomics, imaging, 3D genome structure models, and single-cell data) and external data portals by a new adaptive communication mechanism. Nucleome Browser provides a scalable solution for integrating massive amounts of 4D Nucleome data to navigate multiscale nuclear structure and function in a wide range of biological contexts, enabling hypothesis generation and data sharing with the broad community.

Details

Database :
OpenAIRE
Journal :
Nat Methods
Accession number :
edsair.doi.dedup.....d2cca875ae20a278d7e8b894c06ef082
Full Text :
https://doi.org/10.1101/2022.02.21.481225