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Structures of the first representatives of Pfam family PF06684 (DUF1185) reveal a novel variant of the Bacillus chorismate mutase fold and suggest a role in amino-acid metabolism

Authors :
Dennis Carlton
Jessica Paulsen
Kevin D. Murphy
Polat Abdubek
Mark W. Knuth
Sanjay Krishna
Prasad Burra
Joanna C Grant
Slawomir K. Grzechnik
Edward Nigoghossian
Adam Godzik
Abhinav Kumar
Debanu Das
Ylva Elias
Tamara Astakhova
Aprilfawn White
Andrew T. Morse
Ian A. Wilson
Connie Chen
Ron Reyes
Christopher L. Rife
Daniel McMullan
Christina Puckett
Hsiu-Ju Chiu
Thomas Clayton
Lian Duan
Christina V. Trout
Mitchell D. Miller
Kyle Ellrott
Anna Grzechnik
Claire Acosta
Linda Okach
Scott A. Lesley
Ashley M. Deacon
Christine B Trame
Marc André Elsliger
John Wooley
Dana Weekes
Piotr Kozbial
Hope A. Johnson
Henry J Tien
David Marciano
Julie Feuerhelm
Marc C. Deller
Heath E. Klock
Carol L. Farr
Constantina Bakolitsa
Kevin K. Jin
Dustin C. Ernst
Gye Won Han
Keith O. Hodgson
Herbert L. Axelrod
Henry van den Bedem
Amanda Nopakun
Natasha Sefcovic
Lukasz Jaroszewski
Qingping Xu
Source :
Acta crystallographica. Section F, Structural biology and crystallization communications, vol 66, iss Pt 10, Acta Crystallographica Section F: Structural Biology and Crystallization Communications
Publication Year :
2010
Publisher :
eScholarship, University of California, 2010.

Abstract

Structures of the first representatives of PF06684 (DUF1185) reveal a Bacillus chorismate mutase-like fold with a potential role in amino-acid synthesis.<br />The crystal structures of BB2672 and SPO0826 were determined to resolutions of 1.7 and 2.1 Å by single-wavelength anomalous dispersion and multiple-wavelength anomalous dispersion, respectively, using the semi-automated high-throughput pipeline of the Joint Center for Structural Genomics (JCSG) as part of the NIGMS Protein Structure Initiative (PSI). These proteins are the first structural representatives of the PF06684 (DUF1185) Pfam family. Structural analysis revealed that both structures adopt a variant of the Bacillus chorismate mutase fold (BCM). The biological unit of both proteins is a hexamer and analysis of homologs indicates that the oligomer interface residues are highly conserved. The conformation of the critical regions for oligomerization appears to be dependent on pH or salt concentration, suggesting that this protein might be subject to environmental regulation. Structural similarities to BCM and genome-context analysis suggest a function in amino-acid synthesis.

Details

Database :
OpenAIRE
Journal :
Acta crystallographica. Section F, Structural biology and crystallization communications, vol 66, iss Pt 10, Acta Crystallographica Section F: Structural Biology and Crystallization Communications
Accession number :
edsair.doi.dedup.....d261a4239ffea9fcc0956dd9c1a34aae