Back to Search Start Over

Correction to: Functional analysis of suspected splicing variants in CLCN5 gene in Dent disease 1

Authors :
Tomohiko Yamamura
Tomoko Horinouchi
Rini Rossanti
Masafumi Matsuo
Kandai Nozu
Yuya Aoto
Shinya Ishiko
Yugo Shibagaki
Shingo Ishimori
Daisuke Ichikawa
Tomohiko Inoue
China Nagano
Kazumoto Iijima
Nana Sakakibara
Source :
Clinical and Experimental Nephrology
Publication Year :
2021
Publisher :
Springer Science and Business Media LLC, 2021.

Abstract

In recent years, the elucidation of splicing abnormalities as a cause of hereditary diseases has progressed. However, there are no comprehensive reports of suspected splicing variants in the CLCN5 gene in Dent disease cases. We reproduced gene mutations by mutagenesis, inserted the mutated genes into minigene vectors, and investigated the pathogenicity and onset mechanisms of these variants.We conducted functional splicing assays using a hybrid minigene for six suspected splicing variants (c.105GA, c.105+5GC, c.106-17TG, c.393+4AG, c.517-8AG, c.517-3CA) in CLCN5. We extracted information on these variants from the Human Gene Mutation Database. We reproduced minigene vectors with the insertion of relevant exons with suspected splicing variants. We then transfected these minigene vectors into cultured cells and extracted and analyzed the mRNA. In addition, we conducted in silico analysis to confirm our minigene assay results.We successfully determined that five of these six variants are pathogenic via the production of splicing abnormalities. One showed only normal transcript production and was thus suspected of not being pathogenic (c.106-17TG).We found that five CLCN5 variants disrupted the original splice site, resulting in aberrant splicing. It is sometimes difficult to obtain mRNA from patient samples because of the fragility of mRNA or its low expression level in peripheral leukocytes. Our in vitro system can be used as an alternative to in vivo assays to determine the pathogenicity of suspected splicing variants.

Details

ISSN :
14377799 and 13421751
Volume :
25
Database :
OpenAIRE
Journal :
Clinical and Experimental Nephrology
Accession number :
edsair.doi.dedup.....d1739ca77ffddae8bfe108fb4729180e
Full Text :
https://doi.org/10.1007/s10157-021-02041-8