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Random regression models for the estimation of genetic and environmental covariance functions for growth traits in Santa Ines sheep

Authors :
Natanael Pereira da Silva Santos
José Lindenberg Rocha Sarmento
Paulo Sávio Lopes
Robledo de Almeida Torres
A B Bignard
Lucia Galvão de Albuquerque
Raimundo Nonato Braga Lôbo
Wandrick Hauss de Sousa
Universidade Federal do Piauí (UFPI) - Teresina, PI, Brasil
Universidade Federal de Viçosa (UFV) - Viçosa, MG, Brasil
EMEPA - João Pessoa, PB, Brasil
RAIMUNDO NONATO BRAGA LOBO, CNPC
Universidade Estadual Paulista (UNESP) - Jaboticabal, SP, Brasil
UFV - Viçosa, MG, Brazil
UFPI - Bom Jesus, PI, Brasil
UNESP - Jaboticabal, SP, Brasil.
Source :
LOCUS Repositório Institucional da UFV, Universidade Federal de Viçosa (UFV), instacron:UFV, Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA-Alice), Empresa Brasileira de Pesquisa Agropecuária (Embrapa), instacron:EMBRAPA
Publication Year :
2016

Abstract

Polynomial functions of different orders were used to model random effects associated with weight of Santa Ines sheep from birth to 196 days. Fixed effects included in the models were contemporary groups, age of ewe at lambing, and fourth-order Legendre polynomials for age to represent the average growth curve. In the random part, functions of different orders were included to model variances associated with direct additive and maternal genetic effects and with permanent environmental effects of the animal and mother. Residual variance was fitted by a sixth-order ordinary polynomial for age. The higher the order of the functions, the better the model fit the data. According to the Akaike information criterion and likelihood ratio test, a continuous function of order, five, five, seven, and three for direct additive genetic, maternal genetic, animal permanent environmental, and maternal permanent environmental effects (k = 5573), respectively, was sufficient to model changes in (co)variances with age. However, a more parsimonious model of order three, three, five, and three (k = 3353) was suggested based on Schwarz's Bayesian information criterion for the same effects. Since it was a more flexible model, model k = 5573 provided inconsistent genetic parameter estimates when compared to the biologically expected result. Predicted breeding values obtained with models k = 3353 and k = 5573 differed, especially at young ages. Model k = 3353 adequately fit changes in variances and covariances with time, and may be used to describe changes in variances with age in the Santa Ines sheep studied. Made available in DSpace on 2018-01-26T23:43:14Z (GMT). No. of bitstreams: 1 CNPC2016Random.pdf: 1373435 bytes, checksum: 803443039795cf9ab5dccbf32a8cdff6 (MD5) Previous issue date: 2016-06-23

Details

ISSN :
16765680
Volume :
15
Issue :
2
Database :
OpenAIRE
Journal :
Genetics and molecular research : GMR
Accession number :
edsair.doi.dedup.....d0ea5d6374fd9fd9f7f410909866efe6