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X-ray crystal structure of GarR-tartronate semialdehyde reductase from Salmonella typhimurium
- Source :
- Journal of structural and functional genomics. 10(3)
- Publication Year :
- 2008
-
Abstract
- Tartronate semialdehyde reductases (TSRs), also known as 2-hydroxy-3-oxopropionate reductases, catalyze the reduction of tartronate semialdehyde using NAD as cofactor in the final stage of D-glycerate biosynthesis. These enzymes belong to family of structurally and mechanically related beta-hydroxyacid dehydrogenases which differ in substrate specificity and catalyze reactions in specific metabolic pathways. Here, we present the crystal structure of GarR a TSR from Salmonella typhimurium determined by the single-wavelength anomalous diffraction method and refined to 1.65 A resolution. The active site of the enzyme contains L-tartrate which most likely mimics a position of a glycerate which is a product of the enzyme reaction. The analysis of the TSR structure shows also a putative NADPH binding site in the enzyme.
- Subjects :
- Models, Molecular
Salmonella typhimurium
Stereochemistry
Protein Conformation
Molecular Sequence Data
Crystallography, X-Ray
Biochemistry
Cofactor
Article
Substrate Specificity
Bacterial Proteins
Structural Biology
Oxidoreductase
Genetics
Amino Acid Sequence
Binding site
Selenomethionine
chemistry.chemical_classification
Binding Sites
biology
Active site
General Medicine
Metabolic pathway
Alcohol Oxidoreductases
Enzyme
chemistry
biology.protein
NADPH binding
NAD+ kinase
Subjects
Details
- ISSN :
- 15700267
- Volume :
- 10
- Issue :
- 3
- Database :
- OpenAIRE
- Journal :
- Journal of structural and functional genomics
- Accession number :
- edsair.doi.dedup.....d0c57a158222164e4a485358d319fdaa