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Fast index for approximate string matching

Authors :
Dekel Tsur
Source :
Journal of Discrete Algorithms. 8(4):339-345
Publication Year :
2010
Publisher :
Elsevier BV, 2010.

Abstract

We present an index that stores a text of length n such that given a pattern of length m, all the substrings of the text that are within Hamming distance (or edit distance) at most k from the pattern are reported in O(m+loglogn+#matches) time (for constant k). The space complexity of the index is O(n1+ϵ) for any constant ϵ>0.

Details

ISSN :
15708667
Volume :
8
Issue :
4
Database :
OpenAIRE
Journal :
Journal of Discrete Algorithms
Accession number :
edsair.doi.dedup.....d06481b8dbe4fef0c2d61d2ff8a1ac42
Full Text :
https://doi.org/10.1016/j.jda.2010.08.002