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Evolutionary history of glucose-6-phosphatase encoding genes in vertebrate lineages: towards a better understanding of the functions of multiple duplicates
- Source :
- BMC Genomics, Vol 18, Iss 1, Pp 1-13 (2017), BMC Genomics, BMC Genomics, BioMed Central, 2017, 18 (1), pp.342. ⟨10.1186/s12864-017-3727-1⟩, BMC Genomics (18), 1-13. (2017)
- Publication Year :
- 2017
- Publisher :
- BMC, 2017.
-
Abstract
- Background Glucose-6-phosphate (G6pc) is a key enzyme involved in the regulation of the glucose homeostasis. The present study aims at revisiting and clarifying the evolutionary history of g6pc genes in vertebrates. Results g6pc duplications happened by successive rounds of whole genome duplication that occurred during vertebrate evolution. g6pc duplicated before or around Osteichthyes/Chondrichthyes radiation, giving rise to g6pca and g6pcb as a consequence of the second vertebrate whole genome duplication. g6pca was lost after this duplication in Sarcopterygii whereas both g6pca and g6pcb then duplicated as a consequence of the teleost-specific whole genome duplication. One g6pca duplicate was lost after this duplication in teleosts. Similarly one g6pcb2 duplicate was lost at least in the ancestor of percomorpha. The analysis of the evolution of spatial expression patterns of g6pc genes in vertebrates showed that all g6pc were mainly expressed in intestine and liver whereas teleost-specific g6pcb2 genes were mainly and surprisingly expressed in brain and heart. g6pcb2b, one gene previously hypothesised to be involved in the glucose intolerant phenotype in trout, was unexpectedly up-regulated (as it was in liver) by carbohydrates in trout telencephalon without showing significant changes in other brain regions. This up-regulation is in striking contrast with expected glucosensing mechanisms suggesting that its positive response to glucose relates to specific unknown processes in this brain area. Conclusions Our results suggested that the fixation and the divergence of g6pc duplicated genes during vertebrates’ evolution may lead to adaptive novelty and probably to the emergence of novel phenotypes related to glucose homeostasis. Electronic supplementary material The online version of this article (doi:10.1186/s12864-017-3727-1) contains supplementary material, which is available to authorized users.
- Subjects :
- 0301 basic medicine
Sarcopterygii
glucose 6 phosphate
Duplicated genes
Proteomics
Teleosts
chemistry.chemical_compound
0302 clinical medicine
poisson
duplication de gènes
Gene duplication
Glucose homeostasis
glucose
duplication des génomes
Phylogeny
ComputingMilieux_MISCELLANEOUS
Animal biology
Genetics
trout
teleost
[SDV.BA]Life Sciences [q-bio]/Animal biology
Vertebrate
Heart
duplicated gene
Phenotype
Vertebrates
Glucose-6-Phosphatase
teleosteen
DNA microarray
duplicate genes
expression des gènes
Research Article
Biotechnology
lcsh:QH426-470
brain
lcsh:Biotechnology
truite
Biology
analyse phylogénétique
Synteny
Gene Expression Regulation, Enzymologic
Evolution, Molecular
03 medical and health sciences
biology.animal
lcsh:TP248.13-248.65
Biologie animale
Dietary Carbohydrates
Animals
Humans
gène dupliqué
Gene
Actinopterygii
Myocardium
sarcopterygii
actinopterygii
vertébré
lcsh:Genetics
030104 developmental biology
Glucose 6-phosphate
chemistry
Evolutionary biology
030217 neurology & neurosurgery
homéostasie glucidique
Subjects
Details
- Language :
- English
- ISSN :
- 14712164
- Volume :
- 18
- Issue :
- 1
- Database :
- OpenAIRE
- Journal :
- BMC Genomics
- Accession number :
- edsair.doi.dedup.....d0213e0bc47fbe1491b0d4a40b997a3e
- Full Text :
- https://doi.org/10.1186/s12864-017-3727-1