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Evolutionary history of glucose-6-phosphatase encoding genes in vertebrate lineages: towards a better understanding of the functions of multiple duplicates

Authors :
Elisabeth Plagnes-Juan
Eva Arbenoits
Stéphane Panserat
Lucie Marandel
José L. Soengas
Julien Bobe
Nutrition, Métabolisme, Aquaculture (NuMéA)
Institut National de la Recherche Agronomique (INRA)-Université de Pau et des Pays de l'Adour (UPPA)
Departamento de Bioloxia Funcional e Ciencias da Saude, Laboratorio de Fisioloxia Animal, Facultade de Bioloxia
Universidate de Vigo
Laboratoire de Physiologie et Génomique des Poissons (LPGP)
Institut National de la Recherche Agronomique (INRA)-Structure Fédérative de Recherche en Biologie et Santé de Rennes ( Biosit : Biologie - Santé - Innovation Technologique )
This study was supported by research grants from the INRA PHASE Department (France) to LM and from the Ministerio de Economía y Competitividad (Spain) and European Fund for Regional Development to JLS (AGL2016-74857-C3-1-R and FEDER).
Structure Fédérative de Recherche en Biologie et Santé de Rennes ( Biosit : Biologie - Santé - Innovation Technologique )-Institut National de la Recherche Agronomique (INRA)
Universidade de Vigo
Source :
BMC Genomics, Vol 18, Iss 1, Pp 1-13 (2017), BMC Genomics, BMC Genomics, BioMed Central, 2017, 18 (1), pp.342. ⟨10.1186/s12864-017-3727-1⟩, BMC Genomics (18), 1-13. (2017)
Publication Year :
2017
Publisher :
BMC, 2017.

Abstract

Background Glucose-6-phosphate (G6pc) is a key enzyme involved in the regulation of the glucose homeostasis. The present study aims at revisiting and clarifying the evolutionary history of g6pc genes in vertebrates. Results g6pc duplications happened by successive rounds of whole genome duplication that occurred during vertebrate evolution. g6pc duplicated before or around Osteichthyes/Chondrichthyes radiation, giving rise to g6pca and g6pcb as a consequence of the second vertebrate whole genome duplication. g6pca was lost after this duplication in Sarcopterygii whereas both g6pca and g6pcb then duplicated as a consequence of the teleost-specific whole genome duplication. One g6pca duplicate was lost after this duplication in teleosts. Similarly one g6pcb2 duplicate was lost at least in the ancestor of percomorpha. The analysis of the evolution of spatial expression patterns of g6pc genes in vertebrates showed that all g6pc were mainly expressed in intestine and liver whereas teleost-specific g6pcb2 genes were mainly and surprisingly expressed in brain and heart. g6pcb2b, one gene previously hypothesised to be involved in the glucose intolerant phenotype in trout, was unexpectedly up-regulated (as it was in liver) by carbohydrates in trout telencephalon without showing significant changes in other brain regions. This up-regulation is in striking contrast with expected glucosensing mechanisms suggesting that its positive response to glucose relates to specific unknown processes in this brain area. Conclusions Our results suggested that the fixation and the divergence of g6pc duplicated genes during vertebrates’ evolution may lead to adaptive novelty and probably to the emergence of novel phenotypes related to glucose homeostasis. Electronic supplementary material The online version of this article (doi:10.1186/s12864-017-3727-1) contains supplementary material, which is available to authorized users.

Details

Language :
English
ISSN :
14712164
Volume :
18
Issue :
1
Database :
OpenAIRE
Journal :
BMC Genomics
Accession number :
edsair.doi.dedup.....d0213e0bc47fbe1491b0d4a40b997a3e
Full Text :
https://doi.org/10.1186/s12864-017-3727-1