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A radiogenomic dataset of non-small cell lung cancer

Authors :
Shaimaa Bakr
Hong Zheng
Sylvia K. Plevritis
Ann N. Leung
Sandy Napel
Sebastian Echegaray
Olivier Gevaert
Andrew Quon
Mu Zhou
Joseph B. Shrager
Michael A. Kadoch
Jalen Benson
Kelsey Ayers
Majid Shafiq
Weiruo Zhang
Chuong D. Hoang
Daniel L. Rubin
Source :
Scientific Data
Publication Year :
2018
Publisher :
Springer Science and Business Media LLC, 2018.

Abstract

Medical image biomarkers of cancer promise improvements in patient care through advances in precision medicine. Compared to genomic biomarkers, image biomarkers provide the advantages of being non-invasive, and characterizing a heterogeneous tumor in its entirety, as opposed to limited tissue available via biopsy. We developed a unique radiogenomic dataset from a Non-Small Cell Lung Cancer (NSCLC) cohort of 211 subjects. The dataset comprises Computed Tomography (CT), Positron Emission Tomography (PET)/CT images, semantic annotations of the tumors as observed on the medical images using a controlled vocabulary, and segmentation maps of tumors in the CT scans. Imaging data are also paired with results of gene mutation analyses, gene expression microarrays and RNA sequencing data from samples of surgically excised tumor tissue, and clinical data, including survival outcomes. This dataset was created to facilitate the discovery of the underlying relationship between tumor molecular and medical image features, as well as the development and evaluation of prognostic medical image biomarkers.

Details

Language :
English
ISSN :
20524463
Volume :
5
Database :
OpenAIRE
Journal :
Scientific Data
Accession number :
edsair.doi.dedup.....cf54a2bd198d2b83aef377913b1f2932
Full Text :
https://doi.org/10.1038/sdata.2018.202