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Genome-Wide Analysis of Tubulin Gene Family in Cassava and Expression of Family Member FtsZ2-1 during Various Stress
- Source :
- Plants, Volume 10, Issue 4, Plants, Vol 10, Iss 668, p 668 (2021)
- Publication Year :
- 2021
- Publisher :
- MDPI AG, 2021.
-
Abstract
- Filamentous temperature-sensitive protein Z (Tubulin/FtsZ) family is a group of conserved GTP-binding (guanine nucleotide-binding) proteins, which are closely related to plant tissue development and organ formation as the major component of the cytoskeleton. According to the published genome sequence information of cassava (Manihot esculenta Crantz), 23 tubulin genes (MeTubulins) were identified, which were divided into four main groups based on their type and phylogenetic characteristics. The same grouping generally has the same or similar motif composition and exon–intron structure. Collinear analysis showed that fragment repetition event is the main factor in amplification of cassava tubulin superfamily gene. The expression profiles of MeTubulin genes in various tissue were analyzed, and it was found that MeTubulins were mainly expressed in leaf, petiole, and stem, while FtsZ2-1 was highly expressed in storage root. The qRT-PCR results of the FtsZ2-1 gene under hormone and abiotic stresses showed that indole-3-acetic acid (IAA) and gibberellin A3 (GA3) stresses could significantly increase the expression of the FtsZ2-1 gene, thereby revealing the potential role of FtsZ2-1 in IAA and GA3 stress-induced responses.
- Subjects :
- 0106 biological sciences
0301 basic medicine
abiotic stress
Plant Science
01 natural sciences
Article
cassava
03 medical and health sciences
Gene family
duplication event
FtsZ
Cytoskeleton
Gene
Ecology, Evolution, Behavior and Systematics
Whole genome sequencing
Genetics
Ecology
Phylogenetic tree
biology
Abiotic stress
Botany
food and beverages
FtsZ2-1
030104 developmental biology
Tubulin
tubulin
expression patterns
QK1-989
biology.protein
010606 plant biology & botany
Subjects
Details
- ISSN :
- 22237747
- Volume :
- 10
- Database :
- OpenAIRE
- Journal :
- Plants
- Accession number :
- edsair.doi.dedup.....cebbd2677b0bd833b6486932b389c2d7