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Renormalization group analysis of polymer cyclization with non-equilibrium initial conditions
- Source :
- The European Physical Journal E. 21:25-31
- Publication Year :
- 2006
- Publisher :
- Springer Science and Business Media LLC, 2006.
-
Abstract
- We develop a renormalization group approach for cyclizing polymers for the case when chain ends are initially close together (ring initial conditions). We analyze the behavior at times much shorter than the longest polymer relaxation time. In agreement with our previous work (Europhys. Lett. 73, 621 (2006)) we find that the leading time dependence of the reaction rate k(t) for ring initial conditions and equilibrium initial conditions are related, namely k ring(t) ∝ t -δ and k eq(t) ∝ t 1-δ for times less than the longest polymer relaxation time. Here δ is an effective exponent which approaches δ = 5/4 for very long Rouse chains. Our present analysis also suggests a “sub-leading” term proportional to (ln t)/t which should be particularly significant for smaller values of the renormalized reaction rate and early times. For Zimm dynamics, our RG analysis indicates that the leading time dependence for the reaction rate is k(t) ∼ 1/t for very long chains. The leading term is again consistent with the expected relation between ring and equilibrium initial conditions. We also find a logarithmic correction term which we “exponentiate” to a logarithmic form with a Landau pole. The presence of the logarithm is particularly important for smaller chains and, in the Zimm case, large values of the reaction rate.
- Subjects :
- Models, Molecular
Physics
Work (thermodynamics)
Logarithm
Polymers
Biophysics
Thermodynamics
Surfaces and Interfaces
General Chemistry
Renormalization group
Ring (chemistry)
Reaction rate
Models, Chemical
Landau pole
Exponent
Computer Simulation
General Materials Science
Statistical physics
Algorithms
Biotechnology
Logarithmic form
Subjects
Details
- ISSN :
- 1292895X and 12928941
- Volume :
- 21
- Database :
- OpenAIRE
- Journal :
- The European Physical Journal E
- Accession number :
- edsair.doi.dedup.....cdcbbd721c52d3a3479911bad0a6a297
- Full Text :
- https://doi.org/10.1140/epje/i2006-10042-0