Back to Search
Start Over
Understanding interactions between risk factors, and assessing the utility of the additive and multiplicative models through simulations
- Source :
- PLoS ONE, PLoS ONE, Vol 16, Iss 4, p e0250282 (2021)
- Publication Year :
- 2021
- Publisher :
- Public Library of Science (PLoS), 2021.
-
Abstract
- Understanding the genetic background of complex diseases requires the expansion of studies beyond univariate associations. Therefore, it is important to use interaction assessments of risk factors in order to discover whether, and how genetic risk variants act together on disease development. The principle of interaction analysis is to explore the magnitude of the combined effect of risk factors on disease causation. In this study, we use simulations to investigate different scenarios of causation to show how the magnitude of the effect of two risk factors interact. We mainly focus on the two most commonly used interaction models, the additive and multiplicative risk scales, since there is often confusion regarding their use and interpretation. Our results show that the combined effect is multiplicative when two risk factors are involved in the same chain of events, an interaction called synergism. Synergism is often described as a deviation from additivity, which is a broader term. Our results also confirm that it is often relevant to estimate additive effect relationships, because they correspond to independent risk factors at low disease prevalence. Importantly, we evaluate the threshold of more than two required risk factors for disease causation, called the multifactorial threshold model. We found a simple mathematical relationship (square root) between the threshold and an additive-to-multiplicative linear effect scale (AMLES), where 0 corresponds to an additive effect and 1 to a multiplicative. We propose AMLES as a metric that could be used to test different effects relationships at the same time, given that it can simultaneously reveal additive, multiplicative and intermediate risk effects relationships. Finally, the utility of our simulation study was demonstrated using real data by analyzing and interpreting gene-gene interaction odds ratios from a rheumatoid arthritis case-control cohort.
- Subjects :
- Epidemiology
Single Nucleotide Polymorphisms
Anti-Citrullinated Protein Antibodies
Arthritis, Rheumatoid
Gene Frequency
Risk Factors
Additive function
Databases, Genetic
Medicine and Health Sciences
Econometrics
Drug Interactions
Causation
Mathematics
Multidisciplinary
Simulation and Modeling
Multiplicative function
Genomics
Europe
Medicine
Metric (unit)
Research Article
Science
Immunology
Context (language use)
Rheumatoid Arthritis
Genetic Predisposition
Research and Analysis Methods
Polymorphism, Single Nucleotide
Autoimmune Diseases
Rheumatology
Genetics
Genome-Wide Association Studies
Humans
Genetic Predisposition to Disease
Set (psychology)
Alleles
Pharmacology
Models, Statistical
Arthritis
Univariate
Biology and Life Sciences
Computational Biology
Human Genetics
Protein Tyrosine Phosphatase, Non-Receptor Type 22
Odds ratio
Genome Analysis
Term (time)
Genetic Loci
Relative risk
Medical Risk Factors
Genetics of Disease
Disease risk
Clinical Immunology
Clinical Medicine
Threshold model
Genome-Wide Association Study
HLA-DRB1 Chains
Subjects
Details
- ISSN :
- 19326203
- Volume :
- 16
- Database :
- OpenAIRE
- Journal :
- PLOS ONE
- Accession number :
- edsair.doi.dedup.....cc40bcf015675840e67098a5ad1596f8