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A panel of eight autophagy-related long non-coding RNAs is a good predictive parameter for clear cell renal cell carcinoma
- Source :
- Genomics. 113:740-754
- Publication Year :
- 2021
- Publisher :
- Elsevier BV, 2021.
-
Abstract
- Clear-cell renal cell carcinoma (ccRCC) carries a variable prognosis. Prognostic biomarkers can stratify patients according to risk, and can provide crucial information for clinical decision-making. We screened for an autophagy-related long non-coding lncRNA (lncRNA) signature to improve postoperative risk stratification in The Cancer Genome Atlas (TCGA) database. We confirmed this model in ICGC and SYSU cohorts as a significant and independent prognostic signature. Western blotting, autophagic-flux assay and transmission electron microscopy were used to verify that regulation of expression of 8 lncRNAs related to autophagy affected changes in autophagic flow in vitro. Our data suggest that 8-lncRNA signature related to autophagy is a promising prognostic tool in predicting the survival of patients with ccRCC. Combination of this signature with clinical and pathologic parameters could aid accurate risk assessment to guide clinical management, and this 8-lncRNAs signature related to autophagy may serve as a therapeutic target.
- Subjects :
- 0106 biological sciences
Oncology
medicine.medical_specialty
Biology
01 natural sciences
03 medical and health sciences
Postoperative risk
Renal cell carcinoma
Internal medicine
Autophagy
Biomarkers, Tumor
Genetics
medicine
Humans
Carcinoma, Renal Cell
030304 developmental biology
0303 health sciences
Prognostic signature
medicine.disease
Kidney Neoplasms
Long non-coding RNA
Blot
Clear cell renal cell carcinoma
RNA, Long Noncoding
Risk assessment
010606 plant biology & botany
Subjects
Details
- ISSN :
- 08887543
- Volume :
- 113
- Database :
- OpenAIRE
- Journal :
- Genomics
- Accession number :
- edsair.doi.dedup.....cb1414a2e49b02521025a8b796857a7b