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Sparse connectivity for MAP inference in linear models using sister mitral cells
- Source :
- PLoS Computational Biology, Vol 18, Iss 1, p e1009808 (2022)
- Publication Year :
- 2022
- Publisher :
- Public Library of Science (PLoS), 2022.
-
Abstract
- Sensory processing is hard because the variables of interest are encoded in spike trains in a relatively complex way. A major goal in studies of sensory processing is to understand how the brain extracts those variables. Here we revisit a common encoding model in which variables are encoded linearly. Although there are typically more variables than neurons, this problem is still solvable because only a small number of variables appear at any one time (sparse prior). However, previous solutions require all-to-all connectivity, inconsistent with the sparse connectivity seen in the brain. Here we propose an algorithm that provably reaches the MAP (maximum a posteriori) inference solution, but does so using sparse connectivity. Our algorithm is inspired by the circuit of the mouse olfactory bulb, but our approach is general enough to apply to other modalities. In addition, it should be possible to extend it to nonlinear encoding models.SummarySensory systems must infer latent variables from noisy and ambiguous input. MAP inference – choosing the most likely latent variable given the sensory input – is one of the simplest methods for doing that, but its neural implementation often requires all-to-all connectivity between the neurons involved. In common sensory contexts this can require a single neuron to connect to hundreds of thousands of others, which is biologically implausible. In this work we take inspiration from the ‘sister’ mitral cells of the olfactory system – groups of neurons associated with the same input channel – to derive a method for performing MAP inference using sparse connectivity. We do so by assigning sister cells to random subsets of the latent variables and using additional cells to ensure that sisters correctly share information. We then derive the circuitry and dynamics required for the sister cells to compute the original MAP inference solution. Our work yields a biologically plausible circuit that provably solves the MAP inference problem and provides experimentally testable predictions. While inspired by the olfactory system, our method is quite general, and is likely to apply to other sensory modalities.
- Subjects :
- Sensory Receptor Cells
Sensory processing
QH301-705.5
Computer science
medicine.medical_treatment
Action Potentials
Inference
Sensory system
Latent variable
Mice
Cellular and Molecular Neuroscience
Stimulus modality
Ecology,Evolution & Ethology
Encoding (memory)
medicine
Maximum a posteriori estimation
Genetics
Animals
Biology (General)
Molecular Biology
Ecology, Evolution, Behavior and Systematics
Computational & Systems Biology
Quantitative Biology::Neurons and Cognition
Ecology
business.industry
FOS: Clinical medicine
Neurosciences
Linear model
Pattern recognition
Nonlinear Dynamics
Computational Theory and Mathematics
Modeling and Simulation
Microfabrication & Bioengineering
Artificial intelligence
business
Algorithms
Subjects
Details
- ISSN :
- 15537358
- Volume :
- 18
- Database :
- OpenAIRE
- Journal :
- PLOS Computational Biology
- Accession number :
- edsair.doi.dedup.....ca5a58e6eda1633393f6b9c2fd46ee18
- Full Text :
- https://doi.org/10.1371/journal.pcbi.1009808