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RNA-Seq reveals the molecular mechanism of trapping and killing of root-knot nematodes by nematode-trapping fungi
- Source :
- World Journal of Microbiology and Biotechnology. 33
- Publication Year :
- 2017
- Publisher :
- Springer Science and Business Media LLC, 2017.
-
Abstract
- Nematode-trapping fungi are well known for their inherent potential to trap and kill nematodes using specialized trapping devices. However, the molecular mechanisms underlying the trapping and subsequent processes are still unclear. Therefore, in this study, we examined differential genes expression in two nematode-trapping fungi after baiting with nematode extracts. In Arthrobotrys conoides, 809 transcripts associated with diverse functions such as signal transduction, morphogenesis, stress response and peroxisomal proteins, proteases, chitinases and genes involved in the host-pathogen interaction showed differential expression with fold change (>±1.5 fold) in the presence of nematode extract with FDR (p-value
- Subjects :
- 0301 basic medicine
Proteases
Nematoda
Physiology
030106 microbiology
RNA-Seq
Applied Microbiology and Biotechnology
Microbiology
Fungal Proteins
03 medical and health sciences
Ascomycota
Gene Expression Regulation, Fungal
Gene expression
Animals
Gene
biology
Sequence Analysis, RNA
Conoides
RNA, Fungal
General Medicine
biology.organism_classification
Fold change
Cell biology
030104 developmental biology
Nematode
Host-Pathogen Interactions
Pest Control
Signal transduction
Root Nodules, Plant
Biotechnology
Subjects
Details
- ISSN :
- 15730972 and 09593993
- Volume :
- 33
- Database :
- OpenAIRE
- Journal :
- World Journal of Microbiology and Biotechnology
- Accession number :
- edsair.doi.dedup.....c94910954586e03ec85c994876395699