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Draft genome sequence of Streptomyces hyaluromycini MB-PO13T, a hyaluromycin producer
- Source :
- Standards in Genomic Sciences, Standards in Genomic Sciences, Vol 13, Iss 1, Pp 1-8 (2018)
- Publication Year :
- 2018
- Publisher :
- BioMed Central, 2018.
-
Abstract
- Streptomyces hyaluromycini MB-PO13T (=NBRC 110483T = DSM 100105T) is type strain of the species, which produces a hyaluronidase inhibitor, hyaluromycin. Here, we report the draft genome sequence of this strain together with features of the organism and generation, annotation and analysis of the genome sequence. The 11.5 Mb genome of Streptomyces hyaluromycini MB-PO13T encoded 10,098 putative ORFs, of which 5317 were assigned with COG categories. The genome harbored at least six type I PKS clusters, three type II PKS gene clusters, two type III PKS gene clusters, six NRPS gene clusters, and one hybrid PKS/NRPS gene cluster. The type II PKS gene cluster including 2-amino-3-hydroxycyclopent-2-enone synthetic genes was identified to be responsible for hyaluromycin synthesis. We propose the biosynthetic pathway based on bioinformatic analysis.
- Subjects :
- 0301 basic medicine
lcsh:QH426-470
030106 microbiology
Biosynthesis
Streptomyces
Genome
Short Genome Report
03 medical and health sciences
Polyketide synthase
Gene cluster
Genetics
polycyclic compounds
ORFS
Gene
Whole genome sequencing
biology
Strain (biology)
biology.organism_classification
Rubromycin
lcsh:Genetics
030104 developmental biology
biology.protein
C5N
Subjects
Details
- Language :
- English
- ISSN :
- 19443277
- Volume :
- 13
- Database :
- OpenAIRE
- Journal :
- Standards in Genomic Sciences
- Accession number :
- edsair.doi.dedup.....c8749390ef066e4631093737ebdca05d