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Crassostrea gigas ferritin: cDNA sequence analysis for two heavy chain type subunits and protein purification
- Source :
- Gene, Gene, 2004, 338 (2), pp.187-195. ⟨10.1016/j.gene.2004.04.027⟩, Gene (0378-1119) (Elsevier), 2004-09, Vol. 338, N. 2, P. 187-195
- Publication Year :
- 2004
- Publisher :
- Elsevier BV, 2004.
-
Abstract
- Ferritin has been shown as being the principal iron storage in the majority of living organisms. In marine species, ferritin is also involved in high-level accumulation of (210)Po. As part of our work on the investigation of these radionuclides' concentration in natural environment, ferritin was searched at the gene and protein level. Ferritin was purified from the visceral mass of the oyster Crassostrea gigas by ion-exchange chromatography and HPLC. SDS-PAGE revealed one band of 20 kDa. An Expressed Sequence Tag (EST) library was screened and led to the identification of two complementary DNA (cDNA) involved in ferritin subunit expression. The complete coding sequences and the untranslated regions (UTRs) of the two genes were obtained and a 5' Rapid Amplification of cDNA Ends (RACE) was used to obtain the two iron-responsive elements (IREs) with the predicted stem-loop structures usually present in the 5'-UTR of ferritin mRNA. Sequence alignment in amino acid of the two new cDNA showed an identity with Pinctada fucata (85.4-88.3%), Lymnaea stagnalis (79.3-82.2%) and Helix pomatia (79.1-79.1%). The residues responsible for the ferroxidase center, conserved in all vertebrate H-ferritins, are present in the two oyster ferritin subunits. Oyster ferritins do not present the special characteristics of other invertebrate ferritins like insect ferritins but have some functional similarities with the vertebrate H chains ferritin.
- Subjects :
- Untranslated region
DNA, Complementary
Sequence analysis
Iron
Molecular Sequence Data
Sequence alignment
03 medical and health sciences
Rapid amplification of cDNA ends
Sequence Analysis, Protein
Sequence Homology, Nucleic Acid
Complementary DNA
Genetics
Animals
EST
Amino Acid Sequence
RNA, Messenger
14. Life underwater
Peptide sequence
Chromatography, High Pressure Liquid
Phylogeny
030304 developmental biology
0303 health sciences
Expressed sequence tag
Binding Sites
Base Sequence
Sequence Homology, Amino Acid
biology
Oyster
[SDV.BID.EVO]Life Sciences [q-bio]/Biodiversity/Populations and Evolution [q-bio.PE]
Gene Expression Profiling
Iron-Regulatory Proteins
Sequence Analysis, DNA
04 agricultural and veterinary sciences
General Medicine
Blotting, Northern
Chromatography, Ion Exchange
Ostreidae
Molecular biology
Ferritin
Protein Subunits
Multigene Family
Ferritins
IRE
040102 fisheries
biology.protein
0401 agriculture, forestry, and fisheries
Electrophoresis, Polyacrylamide Gel
Sequence Alignment
Subjects
Details
- ISSN :
- 03781119 and 18790038
- Volume :
- 338
- Database :
- OpenAIRE
- Journal :
- Gene
- Accession number :
- edsair.doi.dedup.....c6ecd90ffc32ee545c37f6f32cc8edf5
- Full Text :
- https://doi.org/10.1016/j.gene.2004.04.027