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Epigenome-wide gene-age interaction analysis reveals reversed effects of PRODH DNA methylation on survival between young and elderly early-stage NSCLC patients
- Source :
- Dipòsit Digital de Documents de la UAB, Universitat Autònoma de Barcelona, Dipòsit Digital de la UB, Universidad de Barcelona, Aging (Albany NY)
- Publication Year :
- 2020
-
Abstract
- DNA methylation changes during aging, but it remains unclear whether the effect of DNA methylation on lung cancer survival varies with age. Such an effect could decrease prediction accuracy and treatment efficacy. We performed a methylation-age interaction analysis using 1,230 early-stage lung adenocarcinoma patients from five cohorts. A Cox proportional hazards model was used to investigate lung adenocarcinoma and squamous cell carcinoma patients for methylation-age interactions, which were further confirmed in a validation phase. We identified one adenocarcinoma-specific CpG probe, cg14326354PRODH, with effects significantly modified by age (HRinteraction = 0.989; 95% CI: 0.986-0.994; P = 9.18×10-7). The effect of low methylation was reversed for young and elderly patients categorized by the boundary of 95% CI standard (HRyoung = 2.44; 95% CI: 1.26-4.72; P = 8.34×10-3; HRelderly = 0.58; 95% CI: 0.42-0.82; P = 1.67×10-3). Moreover, there was an antagonistic interaction between low cg14326354PRODH methylation and elderly age (HRinteraction = 0.21; 95% CI: 0.11-0.40; P = 2.20×10-6). In summary, low methylation of cg14326354PRODH might benefit survival of elderly lung adenocarcinoma patients, providing new insight to age-specific prediction and potential drug targeting.
- Subjects :
- Oncology
methylation–age interaction analysis
Epigenomics
Male
medicine.medical_specialty
Aging
Lung Neoplasms
overall survival
Risk Assessment
Methylation
Cohort Studies
Non-small cell lung cancer
Envelliment
Internal medicine
Carcinoma, Non-Small-Cell Lung
medicine
Biomarkers, Tumor
Proline Oxidase
Humans
Overall survival
Lung cancer
non-small cell lung cancer
Aged
Neoplasm Staging
Lung
DNA methylation
business.industry
Proportional hazards model
aging
Age Factors
Cell Biology
Epigenome
Middle Aged
medicine.disease
Prognosis
Gene Expression Regulation, Neoplastic
medicine.anatomical_structure
CpG site
Càncer de pulmó
Adenocarcinoma
CpG Islands
Female
Methylation-age interaction analysis
business
Metilació
Research Paper
Subjects
Details
- ISSN :
- 19454589
- Database :
- OpenAIRE
- Journal :
- Dipòsit Digital de Documents de la UAB, Universitat Autònoma de Barcelona, Dipòsit Digital de la UB, Universidad de Barcelona, Aging (Albany NY)
- Accession number :
- edsair.doi.dedup.....c599c2ebaa9827aecc2e4f6b9910c23c