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Analysis of the Expression and Prognostic Value of MSH2 in Pan-Cancer Based on Bioinformatics
- Source :
- BioMed Research International, BioMed Research International, Vol 2021 (2021)
- Publication Year :
- 2021
- Publisher :
- Hindawi Limited, 2021.
-
Abstract
- Background. MutS homolog 2 (MSH2), with the function of identifying mismatches and participating in DNA repair, is the “housekeeping gene” in the mismatch repair (MMR) system. MSH2 deficiency has been reported to enhance cancer susceptibility for the association of hereditary nonpolyposis colorectal cancer. However, the expression and prognostic significance of MSH2 have not been studied from the perspective of pan-cancer. Methods. The GTEx database was used to analyze the expression of MSH2 in normal tissues. The TCGA database was used to analyze the differential expression of MSH2 in pan-cancers. The prognostic value of MSH2 in pan-cancer was assessed using Cox regression and Kaplan-Meier analysis. Spearman correlations were used to measure the relationship between the expression level of MSH2 in pan-cancer and the level of immune infiltration, tumor mutational burden (TMB), and microsatellite instability (MSI). Results. MSH2 is highly expressed in most type of cancers and significantly correlated with prognosis. In COAD, KIRC, LIHC, and SKCM, the expression of MSH2 was significantly positively correlated with the abundance of B cells, CD4+ T cells, CD8+ T cells, dendritic cells, macrophages, and neutrophils. In THCA, MSH2 expression correlated with CD8+T Cell showed a significant negative correlation. MSH2 had significantly negative correlations with stromal score and immune score in a variety of cancers and significantly correlated with TMB and MSI of a variety of tumors. Conclusions. MSH2 may play an important role in the occurrence, development, and immune infiltration of cancer. MSH2 can emerge as a potential biomarker for cancer diagnosis and prognosis.
- Subjects :
- Male
congenital, hereditary, and neonatal diseases and abnormalities
Article Subject
Colorectal cancer
T cell
Biology
General Biochemistry, Genetics and Molecular Biology
Lymphocytes, Tumor-Infiltrating
Immune system
Neoplasms
Databases, Genetic
Biomarkers, Tumor
Tumor Microenvironment
medicine
Humans
neoplasms
Genetic Association Studies
General Immunology and Microbiology
Computational Biology
nutritional and metabolic diseases
Microsatellite instability
Cancer
General Medicine
Prognosis
medicine.disease
digestive system diseases
Gene Expression Regulation, Neoplastic
MutS Homolog 2 Protein
medicine.anatomical_structure
MSH2
Mutation
Cancer research
Medicine
Female
Microsatellite Instability
DNA mismatch repair
CD8
Research Article
Subjects
Details
- ISSN :
- 23146141 and 23146133
- Volume :
- 2021
- Database :
- OpenAIRE
- Journal :
- BioMed Research International
- Accession number :
- edsair.doi.dedup.....c49c39fcffe81e2050cc50504444d7f8
- Full Text :
- https://doi.org/10.1155/2021/9485273