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Benchmark on a large cohort for sleep-wake classification with machine learning techniques

Benchmark on a large cohort for sleep-wake classification with machine learning techniques

Authors :
Palotti, Joao
Mall, Raghvendra
Aupetit, Michael
Rueschman, Michael
Singh, Meghna
Sathyanarayana, Aarti
Taheri, Shahrad
Fernandez-Luque, Luis
Source :
NPJ Digital Medicine, npj Digital Medicine, Vol 2, Iss 1, Pp 1-9 (2019)
Publication Year :
2022
Publisher :
Manara - Qatar Research Repository, 2022.

Abstract

Accurately measuring sleep and its quality with polysomnography (PSG) is an expensive task. Actigraphy, an alternative, has been proven cheap and relatively accurate. However, the largest experiments conducted to date, have had only hundreds of participants. In this work, we processed the data of the recently published Multi-Ethnic Study of Atherosclerosis (MESA) Sleep study to have both PSG and actigraphy data synchronized. We propose the adoption of this publicly available large dataset, which is at least one order of magnitude larger than any other dataset, to systematically compare existing methods for the detection of sleep-wake stages, thus fostering the creation of new algorithms. We also implemented and compared state-of-the-art methods to score sleep-wake stages, which range from the widely used traditional algorithms to recent machine learning approaches. We identified among the traditional algorithms, two approaches that perform better than the algorithm implemented by the actigraphy device used in the MESA Sleep experiments. The performance, in regards to accuracy and F1 score of the machine learning algorithms, was also superior to the device’s native algorithm and comparable to human annotation. Future research in developing new sleep-wake scoring algorithms, in particular, machine learning approaches, will be highly facilitated by the cohort used here. We exemplify this potential by showing that two particular deep-learning architectures, CNN and LSTM, among the many recently created, can achieve accuracy scores significantly higher than other methods for the same tasks.Other Information Published in: npj Digital Medicine License: https://creativecommons.org/licenses/by/4.0See article on publisher's website: http://dx.doi.org/10.1038/s41746-019-0126-9

Details

Database :
OpenAIRE
Journal :
NPJ Digital Medicine, npj Digital Medicine, Vol 2, Iss 1, Pp 1-9 (2019)
Accession number :
edsair.doi.dedup.....c34f9b3362f06896a5febec8cd58ca78
Full Text :
https://doi.org/10.57945/manara.21598260.v1