Back to Search
Start Over
Simple high-throughput annotation pipeline (SHAP)
- Source :
- Bioinformatics. 27:2431-2432
- Publication Year :
- 2011
- Publisher :
- Oxford University Press (OUP), 2011.
-
Abstract
- Summary: SHAP (simple high-throughput annotation pipeline) is a lightweight and scalable sequence annotation pipeline capable of supporting research efforts that generate or utilize large volumes of DNA sequence data. The software provides Grid capable analysis, relational storage and Web-based full-text searching of annotation results. Implemented in Java, SHAP recognizes the limited resources of many smaller research groups. Availability: Source code is freely available under GPLv3 at https://sourceforge.net/projects/shap. Contact: matt.demaere@unsw.edu.au; r.cavicchioli@unsw.edu.au
- Subjects :
- Statistics and Probability
Source code
Java
Bioinformatics
Computer science
media_common.quotation_subject
Information Storage and Retrieval
computer.software_genre
Biochemistry
Annotation
Sequence annotation
Humans
Molecular Biology
Throughput (business)
media_common
computer.programming_language
Internet
Database
Molecular Sequence Annotation
Sequence Analysis, DNA
Pipeline (software)
Computer Science Applications
Computational Mathematics
Computational Theory and Mathematics
computer
Software
Subjects
Details
- ISSN :
- 13674811 and 13674803
- Volume :
- 27
- Database :
- OpenAIRE
- Journal :
- Bioinformatics
- Accession number :
- edsair.doi.dedup.....c27081f5948afdcedd46a1559aa0d574