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Switching from a mechanistic model to a continuous model to study at different scales the effect of vine growth on the dynamic of a powdery mildew epidemic

Authors :
Michel Langlais
Jean Baptiste Burie
Agnes Calonnec
Tools of automatic control for scientific computing, Models and Methods in Biomathematics (ANUBIS)
Université Bordeaux Segalen - Bordeaux 2-Université Sciences et Technologies - Bordeaux 1-Inria Bordeaux - Sud-Ouest
Institut National de Recherche en Informatique et en Automatique (Inria)-Institut National de Recherche en Informatique et en Automatique (Inria)-Centre National de la Recherche Scientifique (CNRS)
Institut de Mathématiques de Bordeaux (IMB)
Université Bordeaux Segalen - Bordeaux 2-Université Sciences et Technologies - Bordeaux 1-Université de Bordeaux (UB)-Institut Polytechnique de Bordeaux (Bordeaux INP)-Centre National de la Recherche Scientifique (CNRS)
Santé Végétale (SV)
Institut National de la Recherche Agronomique (INRA)-École Nationale d'Ingénieurs des Travaux Agricoles - Bordeaux (ENITAB)
Agence Nationale de la Recherche [ANR-08-STRA-04]
INRIA, 'Action de Recherche Collaborative' [INRIA M2A3PC]
ANR-08-STRA-0004,ARCHIDEMIO,Modéliser les interactions entre développement et architecture de la plante et épidémies de maladies fongiques aériennes, pour une gestion durable des cultures.(2008)
Université Bordeaux Segalen - Bordeaux 2-Université Sciences et Technologies - Bordeaux 1 (UB)-Inria Bordeaux - Sud-Ouest
Université Bordeaux Segalen - Bordeaux 2-Université Sciences et Technologies - Bordeaux 1 (UB)-Université de Bordeaux (UB)-Institut Polytechnique de Bordeaux (Bordeaux INP)-Centre National de la Recherche Scientifique (CNRS)
SYSTERRA, ANR-08-STRA-04,SYSTERRA, ANR-08-STRA-04
Source :
Annals of Botany, Annals of Botany, Oxford University Press (OUP), 2010, 107 (5), pp.885-895. ⟨10.1093/aob/mcq233⟩, Annals of Botany, 2010, 107 (5), pp.885-895. ⟨10.1093/aob/mcq233⟩, Annals of Botany, Oxford University Press (OUP), 2010, ⟨10.1093/aob/mcq233⟩
Publication Year :
2010
Publisher :
HAL CCSD, 2010.

Abstract

International audience; *Background and Aims : Epidemiological simulation models coupling plant growth with the dispersal and disease dynamics of an airborne plant pathogen were devised for a better understanding of host–pathogen dynamic interactions and of the capacity of grapevine development to modify the progress of powdery mildew epidemics. *Methods : The first model is a complex discrete mechanistic model (M-model) that explicitly incorporates the dynamics of host growth and the development and dispersion of the pathogen at the vine stock scale. The second model is a simpler ordinary differential equations (ODEs) compartmental SEIRT model (C-model) handling host growth (foliar surface) and the ontogenic resistance of the leaves. With the M-model various levels of vine development are simulated under three contrasting climatic scenarios and the relationship between host and disease variables are examined at key periods in the epidemic process. The ability of the C-model to retrieve the main dynamics of the disease for a range of vine growth given by the M-model is investigated. *Key Results : The M-model strengthens experimental results observed regarding the effect of the rate of leaf emergence and of the number of leaves at flowering on the severity of the disease. However, it also underlines strong variations of the dynamics of disease depending on the vigour and indirectly on the climatic scenarios. The C-model could be calibrated by using the M-model provided that different parameters before and after shoot topping and for various vigour levels and inoculation time are used. Biologically relevant estimations of the parameters that could be used for its extension to the vineyard scale are obtained. *Conclusions : The M-model is able to generate a wide range of growth scenarios with a strong impact on disease evolution. The C-model is a promising tool to be used at a larger scale.

Details

Language :
English
ISSN :
03057364 and 10958290
Database :
OpenAIRE
Journal :
Annals of Botany, Annals of Botany, Oxford University Press (OUP), 2010, 107 (5), pp.885-895. ⟨10.1093/aob/mcq233⟩, Annals of Botany, 2010, 107 (5), pp.885-895. ⟨10.1093/aob/mcq233⟩, Annals of Botany, Oxford University Press (OUP), 2010, ⟨10.1093/aob/mcq233⟩
Accession number :
edsair.doi.dedup.....c0f6d9aa28e19b3c01ea95fef840b23b
Full Text :
https://doi.org/10.1093/aob/mcq233⟩