Additional file 1 of RNA-Seq analysis in giant pandas reveals the differential expression of multiple genes involved in cataract formation

Additional file 1: Supplementary Table S1. Alignment statistics. Total reads = number (percentage) of sequences in the clean data (after sequence filtering). Total mapped = number (percentage) of sequences that can be located on the reference sequence. Multiple mapped = number (percentage) of sequences with multiple comparison positions on the reference sequence. Unique mapped = number (percentage) of sequences with unique comparison positions on the reference sequence. Read-1/Read-2 mapped = number (percentage) of Read-1 and Read-2 sequences compared to reference sequence (only the unique mapped sequences were calculated). Reads mapped to +/��� = the number (percentage) of positive and negative chains on the reference sequence compared to the sequencing sequence (only the unique mapped sequences were calculated). Non-splice reads = number (percentage) of all sequences compared to exons. Splice reads = number (percentage) of segmented comparisons of sequences (also known as junction reads) on two exons. Reads mapped in proper pairs = number (percentage) of sequences for simultaneous alignment of two terminal reads.