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DNA methylation events in transcription factors and gene expression changes in colon cancer

Authors :
Laia Paré-Brunet
Ferran Moratalla-Navarro
Victor Moreno
Miguel A. Peinado
María Berdasco
Ramon Salazar
M. Henar Alonso
Rebeca Sanz-Pamplona
David Cordero
Robert Carreras-Torres
Xavier Solé
Anna Díez-Villanueva
Elisabet Guinó
Susanna Aussó
Source :
Epigenomics, r-IGTP. Repositorio Institucional de Producción Científica del Instituto de Investigación Germans Trias i Pujol, instname
Publication Year :
2020

Abstract

Aim: Gain insight about the role of DNA methylation in the malignant growth of colon cancer. Patients & methods: Methylation and gene expression from 90 adjacent-tumor paired tissues and 48 healthy tissues were analyzed. Tumor genes whose change in expression was explained by changes in methylation were identified using linear models adjusted for tumor stromal content. Results: No differences in methylation were found between adjacent and healthy tissues, but clear differences were found between adjacent and tumor samples. We identified hypermethylated CpG islands located in promoter regions that drive differential gene expression of transcription factors and their target genes. Conclusion: Changes in methylation of a few genes provoke important changes in gene expression, by expanding the signal through transcription activation/repression.

Details

ISSN :
1750192X and 17501911
Volume :
12
Issue :
18
Database :
OpenAIRE
Journal :
Epigenomics
Accession number :
edsair.doi.dedup.....bf5c194a607de8145b997ca72e058b5a