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Studies on anticodon-anticodon interactions: hemi-protonation of cytosines induces self-pairing through the GCC anticodon of E. coli tRNA-Gly
- Source :
- Journal of biomolecular structuredynamics. 4(2)
- Publication Year :
- 1986
-
Abstract
- The temperature-jump method was used to compare the stability of anticodon-anticodon duplexes formed by the self-association of two tRNAs: yeast tRNA-Asp and Escherichia coli tRNA-Gly. Yeast tRNA-Asp duplexes contain a U/U mismatch while E. coli tRNA-Gly dimers have a C/C mismatch in the middle position of their quasi self-complementary anticodons GUC and GCC, respectively. At neutral pH, it is found that only tRNA-Asp duplexes exist whereas at pH 5.0 only tRNA-Gly duplexes are formed. This reflects the hemi- protonation of the N3 of the cytosines at pH 5.0 which induces a pairing between the two middle residues of the anticodon GCC in E. coli tRNA-Gly. This is the first evidence that a protonated C-C(+) base pair is compatible with the formation of a double helix with antiparallel strands in a natural RNA molecule.
- Subjects :
- Base Composition
Base pair
Protonation
General Medicine
RNA, Transfer, Gly
Saccharomyces cerevisiae
Biology
RNA, Transfer, Amino Acid-Specific
medicine.disease_cause
Antiparallel (biochemistry)
Yeast
Crystallography
Cytosine
Kinetics
RNA, Transfer
Structural Biology
Pairing
Transfer RNA
medicine
Anticodon
Escherichia coli
Neutral ph
Protons
Molecular Biology
Subjects
Details
- ISSN :
- 07391102
- Volume :
- 4
- Issue :
- 2
- Database :
- OpenAIRE
- Journal :
- Journal of biomolecular structuredynamics
- Accession number :
- edsair.doi.dedup.....bc24bc81ecbb72cba2329b29458a26ef