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Genome-wide meta-analysis identifies 127 open-angle glaucoma loci with consistent effect across ancestries
- Source :
- Nature Communications, 12(1):1258. Nature Publishing Group, NEIGHBORHOOD Consortium, ANZRAG consortium, Biobank Japan project, FinnGen study, UK Biobank Eye and Vision Consortium, GIGA study group & 23 and Me Research Team 2021, ' Genome-wide meta-analysis identifies 127 open-angle glaucoma loci with consistent effect across ancestries ', Nature Communications, vol. 12, no. 1, 1258 . https://doi.org/10.1038/s41467-020-20851-4, Nature Communications, Nature communications, vol 12, iss 1, Nature Communications, Vol 12, Iss 1, Pp 1-16 (2021), Nature Communications, 12, Nature Communications, 12, 1
- Publication Year :
- 2021
-
Abstract
- Primary open-angle glaucoma (POAG), is a heritable common cause of blindness world-wide. To identify risk loci, we conduct a large multi-ethnic meta-analysis of genome-wide association studies on a total of 34,179 cases and 349,321 controls, identifying 44 previously unreported risk loci and confirming 83 loci that were previously known. The majority of loci have broadly consistent effects across European, Asian and African ancestries. Cross-ancestry data improve fine-mapping of causal variants for several loci. Integration of multiple lines of genetic evidence support the functional relevance of the identified POAG risk loci and highlight potential contributions of several genes to POAG pathogenesis, including SVEP1, RERE, VCAM1, ZNF638, CLIC5, SLC2A12, YAP1, MXRA5, and SMAD6. Several drug compounds targeting POAG risk genes may be potential glaucoma therapeutic candidates.<br />Primary open-angle glaucoma (POAG) is highly heritable, yet not well understood from a genetic perspective. Here, the authors perform a meta-analysis of genome-wide association studies in 34,179 POAG cases, identifying 44 previously unreported risk loci and mapping effects across multiple ethnicities.
- Subjects :
- 0301 basic medicine
Aging
genetic structures
General Physics and Astronomy
Glaucoma
PROTEIN
Genome-wide association study
Neurodegenerative
Genome
ANNOTATION
Genome-wide association studies
Sensory disorders Donders Center for Medical Neuroscience [Radboudumc 12]
0302 clinical medicine
Polymorphism (computer science)
Genotype
2.1 Biological and endogenous factors
ANZRAG consortium
Aetiology
GENE-EXPRESSION
Genetics
HUMAN-DISEASES
RISK
Multidisciplinary
and Me Research Team
Single Nucleotide
ASSOCIATION
GIGA study group
Biobank Japan project
3. Good health
PREVALENCE
Open-Angle
Meta-analysis
NEIGHBORHOOD consortium
Optic nerve diseases
Glaucoma, Open-Angle
Asian Continental Ancestry Group
Open angle glaucoma
Science
European Continental Ancestry Group
FinnGen study
Biology
GENOTYPE IMPUTATION
Polymorphism, Single Nucleotide
General Biochemistry, Genetics and Molecular Biology
UK Biobank Eye and Vision Consortium
Article
White People
03 medical and health sciences
Asian People
medicine
Humans
Genetic Predisposition to Disease
3125 Otorhinolaryngology, ophthalmology
Polymorphism
Eye Disease and Disorders of Vision
Genetic association
MUTATIONS
Human Genome
General Chemistry
medicine.disease
eye diseases
030104 developmental biology
Genetic Loci
DIFFERENTIAL EXPRESSION ANALYSIS
030221 ophthalmology & optometry
sense organs
Genome-Wide Association Study
Subjects
Details
- Language :
- English
- ISSN :
- 20411723
- Database :
- OpenAIRE
- Journal :
- Nature Communications, 12(1):1258. Nature Publishing Group, NEIGHBORHOOD Consortium, ANZRAG consortium, Biobank Japan project, FinnGen study, UK Biobank Eye and Vision Consortium, GIGA study group & 23 and Me Research Team 2021, ' Genome-wide meta-analysis identifies 127 open-angle glaucoma loci with consistent effect across ancestries ', Nature Communications, vol. 12, no. 1, 1258 . https://doi.org/10.1038/s41467-020-20851-4, Nature Communications, Nature communications, vol 12, iss 1, Nature Communications, Vol 12, Iss 1, Pp 1-16 (2021), Nature Communications, 12, Nature Communications, 12, 1
- Accession number :
- edsair.doi.dedup.....bb7d731b3bc4c940606176a1a6a7f6af