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Identification and tissue-specific expression of amphioxus GM2 activator protein gene from amphioxus Branchiostoma belcheri
- Source :
- DNA sequence : the journal of DNA sequencing and mapping. 17(2)
- Publication Year :
- 2006
-
Abstract
- An amphioxus cDNA, AmphiGM2AP, encoding GM2 activator protein was isolated from the gut cDNA library of Branchiostoma belcheri. It is 907 bp long, and its longest open reading frame codes for a precursor protein consisting of 242 amino acid residues with a signal peptide of 14 amino acids. The deduced amino acid sequence includes a conserved domain typical of GM2APs between residues 53 and 224, a single N-linked glycosylation site at position 65 and 8 conserved cysteines. Phylogenetic analysis showed that amphiGM2AP forms a club together with invertebrate GM2APs, indicating that AmphiGM2AP is evolutionarily closely related to invertebrate GM2APs rather than vertebrate ones. Both Northern blotting and in situ hybridization histochemistry analyses revealed a tissue-specific expression pattern of AmphiGM2AP in adult amphioxus with the strongest expression in the digestive system, which is in contrast to the widespread expression pattern of human, mouse and sheep GM2AP genes. It is suggested that AmphiGM2AP is possibly involved in the take-in of digested food components like lipid molecules.
- Subjects :
- Signal peptide
Branchiostoma
Protein domain
Molecular Sequence Data
Biology
Biochemistry
Endocrinology
Chordata, Nonvertebrate
Complementary DNA
Genetics
Animals
Amino Acid Sequence
Molecular Biology
Peptide sequence
Gene Library
chemistry.chemical_classification
Base Sequence
cDNA library
G(M2) Activator Protein
Gene Expression Profiling
biology.organism_classification
Molecular biology
Amino acid
Open reading frame
chemistry
Gene Expression Regulation
Sequence Alignment
Subjects
Details
- ISSN :
- 10425179
- Volume :
- 17
- Issue :
- 2
- Database :
- OpenAIRE
- Journal :
- DNA sequence : the journal of DNA sequencing and mapping
- Accession number :
- edsair.doi.dedup.....b9d084472a11269ef917ce58a65520bf