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Common genetic variants and modification of penetrance of BRCA2-Associated breast cancer

Authors :
Mia M Gaudet
Tomas Kirchhoff
Todd Green
Joseph Vijai
Joshua M Korn
Candace Guiducci
Ayellet V Segrè
Kate McGee
Lesley McGuffog
Christiana Kartsonaki
Jonathan Morrison
Sue Healey
Olga M Sinilnikova
Dominique Stoppa-Lyonnet
Sylvie Mazoyer
Marion Gauthier-Villars
Hagay Sobol
Michel Longy
Marc Frenay
GEMO Study Collaborators
Frans B L Hogervorst
Matti A Rookus
J Margriet Collée
Nicoline Hoogerbrugge
Kees E P van Roozendaal
HEBON Study Collaborators
Marion Piedmonte
Wendy Rubinstein
Stacy Nerenstone
Linda Van Le
Stephanie V Blank
Trinidad Caldés
Miguel de la Hoya
Heli Nevanlinna
Kristiina Aittomäki
Conxi Lazaro
Ignacio Blanco
Adalgeir Arason
Oskar T Johannsson
Rosa B Barkardottir
Peter Devilee
Olofunmilayo I Olopade
Susan L Neuhausen
Xianshu Wang
Zachary S Fredericksen
Paolo Peterlongo
Siranoush Manoukian
Monica Barile
Alessandra Viel
Paolo Radice
Catherine M Phelan
Steven Narod
Gad Rennert
Flavio Lejbkowicz
Anath Flugelman
Irene L Andrulis
Gord Glendon
Hilmi Ozcelik
OCGN
Amanda E Toland
Marco Montagna
Emma D'Andrea
Eitan Friedman
Yael Laitman
Ake Borg
Mary Beattie
Susan J Ramus
Susan M Domchek
Katherine L Nathanson
Tim Rebbeck
Amanda B Spurdle
Xiaoqing Chen
Helene Holland
kConFab
Esther M John
John L Hopper
Saundra S Buys
Mary B Daly
Melissa C Southey
Mary Beth Terry
Nadine Tung
Thomas V Overeem Hansen
Finn C Nielsen
Mark H Greene
Phuong L Mai
Ana Osorio
Mercedes Durán
Raquel Andres
Javier Benítez
Jeffrey N Weitzel
Judy Garber
Ute Hamann
EMBRACE
Susan Peock
Margaret Cook
Clare Oliver
Debra Frost
Radka Platte
D Gareth Evans
Fiona Lalloo
Ros Eeles
Louise Izatt
Lisa Walker
Jacqueline Eason
Julian Barwell
Andrew K Godwin
Rita K Schmutzler
Barbara Wappenschmidt
Stefanie Engert
Norbert Arnold
Dorothea Gadzicki
Michael Dean
Bert Gold
Robert J Klein
Fergus J Couch
Georgia Chenevix-Trench
Douglas F Easton
Mark J Daly
Antonis C Antoniou
David M Altshuler
Kenneth Offit
Broad Institute of MIT and Harvard
Korn, Joshua Marc
Korn, Joshua M.
Green, Todd
Guiducci, Candace
Segre, Ayellet V.
Daly, Mark J.
Altshuler, David
Clinical Genetics
Internal Medicine
Pediatric Surgery
Department of Obstetrics and Gynecology
Department of Medical and Clinical Genetics
Genome-Scale Biology (GSB) Research Program
Human genetics
EMGO - Quality of care
MUMC+: DA KG Lab Centraal Lab (9)
Klinische Genetica
Genetica & Celbiologie
RS: GROW - School for Oncology and Reproduction
Universitat de Barcelona
Source :
PLoS Genetics, Scopus-Elsevier, PLoS, PLoS Genetics (print), 6(10). Public Library of Science, PLoS Genetics, 6(10). Public Library of Science, Plos Genetics, 6(10):1001183. Public Library of Science, Dipòsit Digital de la UB, Universidad de Barcelona, PLoS Genetics; 6(10) (2010), Recercat. Dipósit de la Recerca de Catalunya, instname, Gaudet, M M, Kirchhoff, T, Green, T, Vijai, J, Korn, J M, Guiducci, C, Segre, A V, Mcgee, K, McGuffog, L, Kartsonaki, C, Morrison, J, Healey, S, Sinilnikova, O M, Stoppa-Lyonnet, D, Mazoyer, S, Gauthier-Villars, M, Sobol, H, Longy, M, Frenay, M, Hogervorst, F B L, Rookus, M A, Collee, J M, Hoogerbrugge, N, van Roozendaal, K E P, Piedmonte, M, Rubinstein, W S, Nerenstone, S, Van Le, L, Blank, S V, Caldes, T, de la Hoya, M, Nevanlinna, H, Aittomaki, K, Lazaro, C, Blanco, I, Arason, A, Johannsson, O T, Barkardottir, R B, Devilee, P, Olopade, O I, Neuhausen, S L, Wang, X S, Fredericksen, Z S, Peterlongo, P, Manoukian, S, Barile, M, Viel, A, Radice, P, Phelan, C M, Narod, S, Rennert, G, Lejbkowicz, F, Flugelman, A, Andrulis, I L, Glendon, G, Ozcelik, H, Toland, A E, Montagna, M, D'Andrea, E, Friedman, E, Laitman, Y, Borg, A, Beattie, M, Ramus, S J, Domchek, S M, Nathanson, K L, Rebbeck, T, Spurdle, A B, Chen, X Q, Holland, H, John, E M, Hopper, J L, Buys, S S, Daly, M B, Southey, M C, Terry, M B, Tung, N, Hansen, T V O, Nielsen, F C, Greene, M I, Mai, P L, Osorio, A, Duran, M, Andres, R, Benitez, J, Weitzel, J N, Garber, J, Hamann, U, Peock, S, Cook, M, Oliver, C, Frost, D, Platte, R, Evans, D G, Lalloo, F, Eeles, R, Izatt, L, Walker, L & Eason, J A O 2010, ' Common Genetic Variants and Modification of Penetrance of BRCA2-Associated Breast Cancer ', PLoS Genetics, vol. 6, no. 10, pp. e1001183 . https://doi.org/10.1371/journal.pgen.1001183, PLoS Genetics, Vol 6, Iss 10, p e1001183 (2010), University of Manchester-PURE, PLoS Genetics, 6(10), PLOS GENET, 6 (10), Article e1001183. (2010)
Publication Year :
2010
Publisher :
Public Library of Science (PLoS), 2010.

Abstract

The considerable uncertainty regarding cancer risks associated with inherited mutations of BRCA2 is due to unknown factors.1 To investigate whether common genetic variants modify penetrance for BRCA2 mutation carriers, we undertook a two-staged genome-wide association study in BRCA2 mutation carriers. In stage 1 using the Affymetrix 6.0 platform, 592,163 filtered SNPs genotyped were available on 899 young (<br />National Breast Cancer Foundation (U.S.)<br />Starr Cancer Consortium<br />National Institutes of Health (U.S.) (NCI: P20CA103694-3 )<br />Lymphoma Foundation

Subjects

Subjects :
Cancer Research
Linkage disequilibrium
Chromosomes, Human, Pair 20
Genome-wide association study
Penetrance
RECURRENT BRCA1
312 Clinical medicine
QH426-470
PHENOTYPE
Linkage Disequilibrium
0302 clinical medicine
Breast cancer
Gene Frequency
Risk Factors
BRCA2 MUTATION CARRIERS
POPULATION
Genetics (clinical)
Genetics and Genomics/Genetics of Disease
RISK
Genetics
Genetics and Genomics/Medical Genetics
0303 health sciences
Genetics and Genomics/Functional Genomics
ASSOCIATION
Middle Aged
3. Good health
DNA-Binding Proteins
Genetics and Genomics/Gene Function
SUSCEPTIBILITY GENES
030220 oncology & carcinogenesis
Female
Genetics and Genomics/Gene Discovery
Research Article
Adult
Heterozygote
education
BRCA2 MUTATION CARRIERS, SUSCEPTIBILITY GENES, RECURRENT BRCA1, RISK, POPULATION, MODEL, PREDISPOSITION, ASSOCIATION, PHENOTYPE, FREQUENCY
Single-nucleotide polymorphism
Breast Neoplasms
Biology
FREQUENCY
Polymorphism, Single Nucleotide
White People
Càncer de mama
03 medical and health sciences
SDG 3 - Good Health and Well-being
medicine
Humans
Genetic Predisposition to Disease
Receptor, Fibroblast Growth Factor, Type 2
Genetics and Genomics/Genomics
Molecular Biology
Allele frequency
Genetics and Genomics/Cancer Genetics
Ecology, Evolution, Behavior and Systematics
030304 developmental biology
BRCA2 Protein
brca2 mutation carriers susceptibility genes recurrent brca1 risk population model predisposition association phenotype frequency
Chromosomes, Human, Pair 10
Haplotype
Genetics and Genomics
medicine.disease
PREDISPOSITION
MODEL
Minor allele frequency
Haplotypes
Cancer and Oncology
Mutation
Genome-Wide Association Study
Transcription Factors

Details

Language :
English
ISSN :
15537390 and 15537404
Database :
OpenAIRE
Journal :
PLoS Genetics, Scopus-Elsevier, PLoS, PLoS Genetics (print), 6(10). Public Library of Science, PLoS Genetics, 6(10). Public Library of Science, Plos Genetics, 6(10):1001183. Public Library of Science, Dipòsit Digital de la UB, Universidad de Barcelona, PLoS Genetics; 6(10) (2010), Recercat. Dipósit de la Recerca de Catalunya, instname, Gaudet, M M, Kirchhoff, T, Green, T, Vijai, J, Korn, J M, Guiducci, C, Segre, A V, Mcgee, K, McGuffog, L, Kartsonaki, C, Morrison, J, Healey, S, Sinilnikova, O M, Stoppa-Lyonnet, D, Mazoyer, S, Gauthier-Villars, M, Sobol, H, Longy, M, Frenay, M, Hogervorst, F B L, Rookus, M A, Collee, J M, Hoogerbrugge, N, van Roozendaal, K E P, Piedmonte, M, Rubinstein, W S, Nerenstone, S, Van Le, L, Blank, S V, Caldes, T, de la Hoya, M, Nevanlinna, H, Aittomaki, K, Lazaro, C, Blanco, I, Arason, A, Johannsson, O T, Barkardottir, R B, Devilee, P, Olopade, O I, Neuhausen, S L, Wang, X S, Fredericksen, Z S, Peterlongo, P, Manoukian, S, Barile, M, Viel, A, Radice, P, Phelan, C M, Narod, S, Rennert, G, Lejbkowicz, F, Flugelman, A, Andrulis, I L, Glendon, G, Ozcelik, H, Toland, A E, Montagna, M, D'Andrea, E, Friedman, E, Laitman, Y, Borg, A, Beattie, M, Ramus, S J, Domchek, S M, Nathanson, K L, Rebbeck, T, Spurdle, A B, Chen, X Q, Holland, H, John, E M, Hopper, J L, Buys, S S, Daly, M B, Southey, M C, Terry, M B, Tung, N, Hansen, T V O, Nielsen, F C, Greene, M I, Mai, P L, Osorio, A, Duran, M, Andres, R, Benitez, J, Weitzel, J N, Garber, J, Hamann, U, Peock, S, Cook, M, Oliver, C, Frost, D, Platte, R, Evans, D G, Lalloo, F, Eeles, R, Izatt, L, Walker, L & Eason, J A O 2010, ' Common Genetic Variants and Modification of Penetrance of BRCA2-Associated Breast Cancer ', PLoS Genetics, vol. 6, no. 10, pp. e1001183 . https://doi.org/10.1371/journal.pgen.1001183, PLoS Genetics, Vol 6, Iss 10, p e1001183 (2010), University of Manchester-PURE, PLoS Genetics, 6(10), PLOS GENET, 6 (10), Article e1001183. (2010)
Accession number :
edsair.doi.dedup.....b96f1c8ba5f04bbdf08dc774a2add64a
Full Text :
https://doi.org/10.1371/journal.pgen.1001183