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Introductions and early spread of SARS-CoV-2 in France, 24 January to 23 March 2020
- Source :
- Eurosurveillance, Eurosurveillance, 2020, 25 (26), ⟨10.2807/1560-7917.ES.2020.25.26.2001200⟩, Eurosurveillance, European Centre for Disease Prevention and Control, 2020, 25 (26), ⟨10.2807/1560-7917.ES.2020.25.26.2001200⟩
- Publication Year :
- 2020
- Publisher :
- European Centre for Disease Control and Prevention (ECDC), 2020.
-
Abstract
- International audience; Following SARS-CoV-2 emergence in China, a specific surveillance was implemented in France. Phylogenetic analysis of sequences retrieved through this surveillance suggests that detected initial introductions, involving non-clade G viruses, did not seed local transmission. Nevertheless, identification of clade G variants subsequently circulating in the country, with the earliest from a patient who neither travelled to risk areas nor had contact with travellers, suggests that SARS-CoV-2 might have been present before the first recorded local cases.
- Subjects :
- 0301 basic medicine
MESH: Coronavirus Infections
Epidemiology
[SDV]Life Sciences [q-bio]
phylogeny
Disease Outbreaks
0302 clinical medicine
MESH: Reverse Transcriptase Polymerase Chain Reaction
MESH: Coronavirus
outbreak surveillance
MESH: COVID-19
030212 general & internal medicine
MESH: Disease Outbreaks
MESH: Phylogeny
Clade
virus genomics
Phylogenetic tree
biology
Reverse Transcriptase Polymerase Chain Reaction
Transmission (medicine)
3. Good health
Geography
MESH: RNA, Viral
MESH: Sentinel Surveillance
RNA, Viral
MESH: Betacoronavirus
France
MESH: Genome, Viral
Coronavirus Infections
Sequence Analysis
Rapid Communication
MESH: Pandemics
2019-20 coronavirus outbreak
Coronavirus disease 2019 (COVID-19)
Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)
Pneumonia, Viral
Zoology
Genome, Viral
Betacoronavirus
Viral Proteins
MESH: Sequence Analysis
03 medical and health sciences
Virology
Humans
MESH: SARS-CoV-2
Pandemics
MESH: Humans
SARS-CoV-2
Public Health, Environmental and Occupational Health
COVID-19
biology.organism_classification
MESH: Viral Proteins
Coronavirus
MESH: France
030104 developmental biology
MESH: Pneumonia, Viral
[SDV.SPEE]Life Sciences [q-bio]/Santé publique et épidémiologie
Sentinel Surveillance
Subjects
Details
- ISSN :
- 15607917 and 1025496X
- Volume :
- 25
- Database :
- OpenAIRE
- Journal :
- Eurosurveillance
- Accession number :
- edsair.doi.dedup.....b89bb167bce1775bedcb7b0d7a40f893