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Fine-Tuning Approach for Segmentation of Gliomas in Brain Magnetic Resonance Images with a Machine Learning Method to Normalize Image Differences among Facilities

Authors :
Nobuhiro Hata
Shota Tanaka
Akitake Mukasa
Masahiro Nonaka
Ryohei Otani
Kensuke Tateishi
Kazuma Kobayashi
Junya Fukai
Yoshiko Okita
Naohiro Tsuyuguchi
Masamichi Takahashi
Jun Sese
Yoshitaka Narita
Ryo Nishikawa
Takehiro Uda
Naoki Shinojima
Risa Kawaguchi
Mototaka Miyake
Hideyuki Arita
Kaoru Tamura
Manabu Kinoshita
Ryuji Hamamoto
Fumi Higuchi
Kuniaki Saito
Koichi Ichimura
Motoo Nagane
Satoshi Takahashi
Yonehiro Kanemura
Source :
Cancers, Vol 13, Iss 1415, p 1415 (2021), Cancers, Volume 13, Issue 6
Publication Year :
2021
Publisher :
MDPI AG, 2021.

Abstract

Machine learning models for automated magnetic resonance image segmentation may be useful in aiding glioma detection. However, the image differences among facilities cause performance degradation and impede detection. This study proposes a method to solve this issue. We used the data from the Multimodal Brain Tumor Image Segmentation Benchmark (BraTS) and the Japanese cohort (JC) datasets. Three models for tumor segmentation are developed. In our methodology, the BraTS and JC models are trained on the BraTS and JC datasets, respectively, whereas the fine-tuning models are developed from the BraTS model and fine-tuned using the JC dataset. Our results show that the Dice coefficient score of the JC model for the test portion of the JC dataset was 0.779 ± 0.137, whereas that of the BraTS model was lower (0.717 ± 0.207). The mean Dice coefficient score of the fine-tuning model was 0.769 ± 0.138. There was a significant difference between the BraTS and JC models (p &lt<br />0.0001) and the BraTS and fine-tuning models (p = 0.002)<br />however, no significant difference between the JC and fine-tuning models (p = 0.673). As our fine-tuning method requires fewer than 20 cases, this method is useful even in a facility where the number of glioma cases is small.

Details

Language :
English
ISSN :
20726694
Volume :
13
Issue :
1415
Database :
OpenAIRE
Journal :
Cancers
Accession number :
edsair.doi.dedup.....b7fd3c9a3515ce166786d68f6123e033