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Oblique Random Forests for 3-D Vessel Detection Using Steerable Filters and Orthogonal Subspace Filtering

Authors :
Bruno Weber
Bjoern H. Menze
Gábor Székely
Matthias Schneider
Sven Hirsch
Computer Vision Laboratory - ETHZ [Zurich]
Eidgenössische Technische Hochschule - Swiss Federal Institute of Technology [Zürich] (ETH Zürich)
Institute of Pharmacology and Toxicology [Zurich]
Universität Zürich [Zürich] = University of Zurich (UZH)
Analysis and Simulation of Biomedical Images (ASCLEPIOS)
Inria Sophia Antipolis - Méditerranée (CRISAM)
Institut National de Recherche en Informatique et en Automatique (Inria)-Institut National de Recherche en Informatique et en Automatique (Inria)
Source :
Medical Computer Vision. Recognition Techniques and Applications in Medical Imaging ISBN: 9783642366192, MCV, MICCAI Workshop on Medical Computer Vision (MCV), MICCAI Workshop on Medical Computer Vision (MCV), Oct 2012, Nice, France. pp.142-154, ⟨10.1007/978-3-642-36620-8_15⟩
Publication Year :
2013
Publisher :
Springer Berlin Heidelberg, 2013.

Abstract

International audience; We propose a machine learning-based framework using oblique random forests for 3-D vessel segmentation. Two different kinds of features are compared. One is based on orthogonal subspace filtering where we learn 3-D eigenspace filters from local image patches that return task optimal feature responses. The other uses a specific set of steerable filters that show, qualitatively,similarities to the learned eigenspace filters, but also allow for explicit parametrization of scale and orientation that we formally generalize to the 3-D spatial context. In this way, steerable filters allow to efficiently compute oriented features along arbitrary directions in 3-D. The segmentation performance is evaluated on four 3-D imaging datasets of the murine visual cortex at a spatial resolution of 0.7μm. Our experiments show that the learning-based approach is able to significantly improve the segmentation compared to conventional Hessian-based methods. Features computed based on steerable filters prove to be superior to eigenfilter-based features for the considered datasets. We further demonstrate that random forests using oblique split directions outperform decision tree ensembles with univariate orthogonal splits

Details

ISBN :
978-3-642-36619-2
ISBNs :
9783642366192
Database :
OpenAIRE
Journal :
Medical Computer Vision. Recognition Techniques and Applications in Medical Imaging ISBN: 9783642366192, MCV, MICCAI Workshop on Medical Computer Vision (MCV), MICCAI Workshop on Medical Computer Vision (MCV), Oct 2012, Nice, France. pp.142-154, ⟨10.1007/978-3-642-36620-8_15⟩
Accession number :
edsair.doi.dedup.....b6cf45bf21218e3801e42631e035033f