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Double electron-electron resonance shows cytochrome P450cam undergoes a conformational change in solution upon binding substrate
- Source :
- Proceedings of the National Academy of Sciences of the United States of America. 109(32)
- Publication Year :
- 2012
-
Abstract
- Although cytochrome P450cam from Pseudomonas putida , the archetype for all heme monooxygenases, has long been known to have a closed active site, recent reports show that the enzyme can also be crystallized in at least two clusters of open conformations. This suggests that the enzyme may undergo significant conformational changes during substrate binding and catalytic turnover. However, these conformations were observed in the crystalline state, and information is needed about the conformations that are populated in solution. In this study, double electron–electron resonance experiments were performed to observe substrate-induced changes in distance as measured by the dipolar coupling between spin labels introduced onto the surface of the enzyme on opposite sides of the substrate access channel. The double electron–electron resonance data show a decrease of 0.8 nm in the distance between spin labels placed at S48C and S190C upon binding the substrate camphor. A rotamer distribution model based on the crystal structures adequately describes the observed distance distributions. These results demonstrate conclusively that, in the physiologically relevant solution state, the substrate-free enzyme exists in the open P450cam-O conformation and that camphor binding results in conversion to the closed P450cam-C form. This approach should be useful for investigating many other P450s, including mammalian forms, in which the role of conformational change is of central importance but not well understood.
- Subjects :
- Models, Molecular
Conformational change
Multidisciplinary
Crystallography
biology
Cytochrome
Camphor 5-Monooxygenase
Chemistry
Stereochemistry
Protein Conformation
Pseudomonas putida
Electron Spin Resonance Spectroscopy
Substrate (chemistry)
Active site
law.invention
Protein structure
law
Physical Sciences
biology.protein
Spin Labels
Electron paramagnetic resonance
Spin label
Conformational isomerism
Protein Binding
Subjects
Details
- ISSN :
- 10916490
- Volume :
- 109
- Issue :
- 32
- Database :
- OpenAIRE
- Journal :
- Proceedings of the National Academy of Sciences of the United States of America
- Accession number :
- edsair.doi.dedup.....b5a8dbee3a148ca4456b43cc3b5fb1d3