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Highly specific marker genes for detecting minimal gastric cancer cells in cytology negative peritoneal washings
- Source :
- Biochemical and Biophysical Research Communications. 313:931-937
- Publication Year :
- 2004
- Publisher :
- Elsevier BV, 2004.
-
Abstract
- Peritoneal wash cytology plays a pivotal role in the decision for gastric cancer treatment because advanced gastric cancer often turns out incurable with peritoneal metastasis. Molecular detection of minimal cancer cells from peritoneal washings may overcome the sensitivity boundary of conventional cytology and contribute to the prediction of the disease outcome. To select marker candidates out of ten thousands of genes, we performed microarray analyses in 12 gastric cell lines and 8 peritoneal washings of early stage cases. With 40 candidates selected by the above expression profiling, RT-PCR in 16 representative peritoneal wash samples was performed to identify genes specific to cytology positive samples. The finally selected five genes, CK20, FABP1, MUC2, TFF1, and TFF2, were then evaluated for their utility as a marker for minimal residual disease in 99 peritoneal wash samples. Nested RT-PCR using the five genes showed positive results highly specific to incurable cases (91-100%). With a high specificity, the combination of these five genes succeeded in identifying 6 out of 20 (30%) additional patients with all types of early recurrence that could not be predicted by the conventional method. The six newly identified recurrences included four non-peritoneal ones, showing that RT-PCR using the five genes without a real-time quantitative PCR technique contributes to the detection of minimal residual disease.
- Subjects :
- Pathology
Muscle Proteins
Keratin-20
Biochemistry
Intermediate Filament Proteins
Cytology
Ascitic Fluid
Peritoneal Lavage
RNA, Neoplasm
Oligonucleotide Array Sequence Analysis
education.field_of_study
Reverse Transcriptase Polymerase Chain Reaction
Trefoil factor 2
Neoplasm Proteins
Real-time polymerase chain reaction
Trefoil Factor-1
Trefoil Factor-2
Trefoil Factor-3
Fatty Acid-Binding Protein 7
Genetic Markers
medicine.medical_specialty
Cytodiagnosis
Biophysics
Biology
Fatty Acid-Binding Proteins
Stomach Neoplasms
Biomarkers, Tumor
medicine
Humans
RNA, Messenger
education
Molecular Biology
DNA Primers
Mucin-2
Base Sequence
Gene Expression Profiling
Tumor Suppressor Proteins
Keratin 20
Neuropeptides
Mucins
Proteins
Cell Biology
Minimal residual disease
Peritoneal washing
Carcinoembryonic Antigen
Gene expression profiling
Genetic marker
Immunology
Carrier Proteins
Peptides
Subjects
Details
- ISSN :
- 0006291X
- Volume :
- 313
- Database :
- OpenAIRE
- Journal :
- Biochemical and Biophysical Research Communications
- Accession number :
- edsair.doi.dedup.....b48dc8f7948886994f84e95acb0ced12